Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq886 194 2e-44 seq2440 150 2e-31 seq1520 98.7 1e-15 seq1379 93.3 5e-14 >seq886 Length=61200 Score = 194 bits (214), Expect = 2e-44 Identities = 388/568 (68%), Gaps = 9/568 (2%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| ||| || | |||||| || | ||| || | ||||| || |||| | Sbjct 12506 CAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAG 12447 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||||| |||||||| || | |||||| |||||||| || || ||||| |||||| Sbjct 12446 CCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAA 12387 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC-ATAACCG-GCGCTG-TCATGT 32837 || ||||| || || |||||||| | || | ||| || | ||||| | ||| ||| Sbjct 12386 ATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGCTCATCACTG 12327 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| ||||||| |||||||| || | ||||| || ||||| ||||||| | Sbjct 12326 ATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATGGTCTCGATAGCATCA 12267 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 || || | | ||| | ||||| | ||||| || || | |||| || | Sbjct 12266 AAAAGGAAATCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTC 12207 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || || |||||||| || || || || || ||||||||||| | ||||| | | | Sbjct 12206 TCAGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGTGCCTCAGCGACC 12147 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 |||||||| | | || ||||| | ||| || || || || || ||| ||| ||| Sbjct 12146 TGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTAACAATGCCATCAGAGGCGGCA 12087 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCA 33133 || ||||| | ||| | || || || |||| ||| || | || ||||| Sbjct 12086 AAGAACGCGAGGACACGGGAGATGAAGAATCGTTCG-CTGTCATTCAGGCGGTTGTTCCA 12028 Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193 |||| | ||||| |||| ||||| |||||| | ||||| || || ||||| ||||| Sbjct 12027 GTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCTCGGCCTT 11968 Query 33194 TTTATACATATTCCAGATGTCATGATAT 33221 || ||||| | ||| || | || |||| Sbjct 11967 CTTGTACATTTGCCATATCTGAT-ATAT 11941 >seq2440 Length=22844 Score = 150 bits (166), Expect = 2e-31 Identities = 374/560 (67%), Gaps = 12/560 (2%) Strand=Plus/Minus Query 32651 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 32710 ||||| ||||| ||||| ||| ||| | ||||| || | ||| || | ||| || || Sbjct 14540 AAACAGTAAACAGGCGAAGTCGGTGTGCATTCCCTCATCACGACTGATGAGTTCATTTGA 14481 Query 32711 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 32770 ||||| || || ||||| || || | || || | ||| || || | |||||||| | Sbjct 14480 AAACGAAAGACCAGGCATAAGCCCCCTTTTCTTCAACCAGAAGATTGCGGCAAATGAACT 14421 Query 32771 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT 32830 ||| || || | ||| || || || ||||| || | || | || || ||| | | Sbjct 14420 AGAGAAAAAGAGTCCCTCAACAGCTGCAAATGCGACGAGCCGTTCCGCA-AACGTATGAT 14362 Query 32831 --GTC--ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 | | || ||||| || |||||| || || || | | |||| || || | Sbjct 14361 TGGCCGAATCGATCCATTTCAAAGCCCATGTTGCTTTATTGGCAATAGAAGGGATGGTTT 14302 Query 32887 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--A 32944 | || || ||| | | ||||| || | | | || ||| || | || | | Sbjct 14301 CGATGGCGGAAAATAAGTGGTTTTGTTGTTCGGTGTTGGGAATATAGGTTTGGATAAGCA 14242 Query 32945 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCT 33004 |||| |||||| ||||||||||| ||||| || |||||||| |||||||| || | Sbjct 14241 AAGA--ATACATCTCCGAATGAATATTTTCCATCATGATTTGAAAGCCGTAGAAACAACG 14184 Query 33005 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33064 ||| || | || | || || | |||||| | | | |||| |||||||| || || || Sbjct 14183 AGCTTCAGGAAGTTTAACCTCGGAGCAAAATTGCTGTACTAAGTTTTCATTGACAATACC 14124 Query 33065 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTT 33122 ||| || ||||| ||||| | ||| | | || | ||| || | || Sbjct 14123 GTCCGCCGCAGCAAAGAACGCAATAACACGACAAACGAAGTGACGTTCATCATTATTGAG 14064 Query 33123 AGTT-TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181 || | ||||||| || ||| | ||||| || | |||||||||||||||||||||||| || Sbjct 14063 AGCTGTATTCCAGTCCTTGTTGTCTTTGGAGAGATCCACTTCTTCCACTGTCCAAAAAGA 14004 Query 33182 TGCCTCTGCCTTTTTATACA 33201 |||| | |||||||| |||| Sbjct 14003 TGCCACAGCCTTTTTGTACA 13984 >seq1520 Length=48961 Score = 98.7 bits (108), Expect = 1e-15 Identities = 371/571 (65%), Gaps = 22/571 (4%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 ||||| || ||| ||| | || || || | || || | |||||| ||||| || | Sbjct 6190 CATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAAC 6249 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || |||| || ||||| ||||| | |||||||||| |||| || ||||| || || ||| Sbjct 6250 CCAGGCAATAATCCACGTTTTTTGATCCAAAATATGCACGCGAAAGATCCGGAGAAAAAA 6309 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCA----TAACCGGCGCTGTCATG 32836 |||||||| | || | || |||| |||| || || |||| | | ||| | Sbjct 6310 ATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTGATC-GTCTTC 6368 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| || | ||||| | || || | ||| | ||||| || || || |||| | | Sbjct 6369 GATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACT 6428 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATAC 32954 || | | | ||| ||||| | ||| || | ||||| ||||| || Sbjct 6429 GAACAAGAATGATCGTTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGA--GTAA 6486 Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATT---TGAAATCCGTAGAAGCATCTAGCCTCG 33011 |||| ||||| |||||||| || |||| || ||||| |||||| ||| |||||| Sbjct 6487 GTTTCTGAATGGATGTTTTCCAT---CATTGACTGGAATCCATAGAAGGATCGAGCCTCA 6543 Query 33012 GTAATCTGTACTTCTGTACAAAATCGTTCTGCT-AAATTTTCATTCACTATTCCGTCACT 33070 | | ||| | ||| || | || | | | | || ||||| || || || ||||| Sbjct 6544 GCGACCTGAATTTCACTAGAGAAGTG-ACGGATCAAGTTTTCGTTTACAATACCGTCGGA 6602 Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG-GT--GTTAGTTT 33127 || || ||||| || | ||| | | ||| | |||| || || | | || Sbjct 6603 CGCAGCGAAAAATGCTAGCACACGAGCCGTGAAAAAGCGCTCGTTTGCGTTCATGCGGTT 6662 Query 33128 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 33187 ||||| || | | ||| || || | || | |||||| ||||| || || ||||| Sbjct 6663 GTTCCAGTCGTGCAAATCGTTTGAAAGGTCTATTTCTTCGGTAGTCCAGAAGGAAGCCTC 6722 Query 33188 TGCCTTTTTATACATATTCCAGA--TGTCAT 33216 || ||||| ||| | ||||| |||||| Sbjct 6723 AGCTTTTTTGTACCTTCGCCAGATCTGTCAT 6753 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 32385 ACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAAT 32444 || || ||||| |||||||| ||||| ||||| | ||||| | ||||||||||| || Sbjct 5861 ACTCGCTTTTCAAAAAAATTTGTTTTTCCTTCCAGAGATATCATGTCCATGAAATCAAAA 5920 Query 32445 GGATTGGTAACATTATAAAtttttttAAATCCCAA-TTCAGAAATCAATCTATCTGCGAC 32503 || || | ||||| || | ||| || |||||| | || || || || ||| || | Sbjct 5921 GGGTTCCTGACATTGTATAATTTGTT-GTTCCCAAGTGCATTAAGCAGTCCATCCGCAAT 5979 Query 32504 AAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGC 32563 || || || ||| | ||||| ||| ||||||||||||| | | |||||||| ||| Sbjct 5980 GAACTCGATGTATATGCACATCAGCTCATAATTCATTCCTATCAAGTCAACTGGAATAGC 6039 >seq1379 Length=51093 Score = 93.3 bits (102), Expect = 5e-14 Identities = 169/241 (70%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 63079 CATA-AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 |||| || | ||| |||||||| ||||| ||||| || | |||| |||| || | Sbjct 1917 CATACAACAAATCTGGAATCCATAGAGCGTAAAATAAGTCGCGTGTTCGCAGTTCTTCCT 1858 Query 63138 TTCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63196 | || || | | | ||| | || || ||| | || || | |||||||||||| | | Sbjct 1857 TCCCGTGGACTTTGCGCAAGCT-GATGATCGCGAAGATGTCTGCATGCCACGGTTCAACG 1799 Query 63197 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63256 || ||||| | | |||| || ||||| || ||||| ||||| | |||||| | || | Sbjct 1798 TAGATGGCTAAAGCTCCGGGACGTTTATTGCCTCCTTGATCAACGTATCTTGACGTAGCA 1739 Query 63257 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTA-CCATTGGTCCCTGAGATATA 63315 ||||||||| | ||| |||| |||||| || || ||| || || || || | ||||| Sbjct 1738 TTATAAACTTGAAGCATCGGAACAATACCGTTAGA-GTACCCGTTCGTTCCAGCAATATA 1680 Query 63316 G 63316 | Sbjct 1679 G 1679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633607898222800