Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13]
3,043 sequences; 40,928,581 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2556 212 7e-50
seq886 165 9e-36
seq2440 163 3e-35
seq1520 138 1e-27
>seq2556
Length=115598
Score = 212 bits (234), Expect = 7e-50
Identities = 390/561 (70%), Gaps = 13/561 (2%)
Strand=Plus/Plus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAAT--GTTA 93149
||||| || ||||||||||||||||| ||||| || | ||| || ||||| ||||
Sbjct 98486 CACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTT--TGAATAAGTTA 98543
Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209
|| || | ||| || || ||||| | ||| || || ||||| || ||||||||||
Sbjct 98544 GGCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAA 98603
Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGC 93269
| || || || || || || |||||||| | | || |||||| | || || | |
Sbjct 98604 AGATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGT-GCTTCGTTTGT-C 98661
Query 93270 TGAT--CCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
||| |||||| | ||||| |||||||| ||| || || |||| |||||| || ||
Sbjct 98662 AGATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 98721
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| || || || | || | | ||| | |||||||||||| | |||||| ||
Sbjct 98722 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 98781
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG- 93446
|||||||||| || || ||||| |||||||| || || || | | || || |
Sbjct 98782 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 98841
Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506
|| | |||||||| | ||||| | ||| | |||||||| || || ||||| || || |
Sbjct 98842 TGCT-TGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGG 98900
Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCA-TCTTTAA--GCTTAT 93563
| ||||| || || | | ||| | || ||||| ||| ||| | ||||| ||| |
Sbjct 98901 CGGCAAAGAATGCAAGGACATGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGT 98960
Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623
||| ||| ||||| | | || || | ||||| ||||| |||||||||||||
Sbjct 98961 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 99020
Query 93624 CTTTTTTGTACATATCCCATA 93644
|||| |||||||| | |||||
Sbjct 99021 CTTTCTTGTACATCTGCCATA 99041
>seq886
Length=61200
Score = 165 bits (182), Expect = 9e-36
Identities = 375/560 (67%), Gaps = 7/560 (1%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| || ||||||||||| | ||| || || || || | ||| || ||| | ||
Sbjct 12507 GCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAA 12448
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | | ||| || ||||| | |||||| || || || || ||||| || ||
Sbjct 12447 GCCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAA 12388
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
|| ||||| || || ||||| || || | ||| ||| | ||| | | | | ||
Sbjct 12387 AATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGCTCATCACT 12328
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
|||||| | |||||| ||||| || ||| || ||||| | || |||||||| |
Sbjct 12327 GATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATGGTCTCGATAGCATC 12268
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
||| ||| |||| || ||| | | ||| |||||||| ||||| | ||||| || |
Sbjct 12267 AAAAAGGAAATCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGT 12208
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
||||| || | |||||||| ||| ||||| |||||||| || | || || | ||
Sbjct 12207 CTCAGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGTGCCTCAGCGAC 12148
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
||| ||||| | || || | || | ||||| || || || || ||||| || || ||
Sbjct 12147 CTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTAACAATGCCATCAGAGGCGGC 12088
Query 93511 aaaaaaaGCCAATATATGCTTTAT--AAAATGTTTCTC-ATCATCTTTAAGC--TTATCC 93565
||| || || | | | | || | ||| ||| | ||| || | || || | |
Sbjct 12087 AAAGAACGCGAGGACACGGGAGATGAAGAATCGTTCGCTGTCA--TTCAGGCGGTTGTTC 12030
Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625
|| || || |||||||| | ||| | ||||| ||||||| || || || || ||
Sbjct 12029 CAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCTCGGCC 11970
Query 93626 TTTTTGTACATATCCCATAT 93645
|| |||||||| | ||||||
Sbjct 11969 TTCTTGTACATTTGCCATAT 11950
>seq2440
Length=22844
Score = 163 bits (180), Expect = 3e-35
Identities = 382/572 (67%), Gaps = 17/572 (3%)
Strand=Plus/Minus
Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143
||| ||| || || |||||||| || | || || || || || | ||||| |
Sbjct 14538 ACAGTAAACAGGCGAAGTCGGTGTGCATTCCCTCATCACGACTGATGAGTTCATTTGAAA 14479
Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203
| | | ||| || | || || | |||||| | ||| || |||| ||||| || ||
Sbjct 14478 ACGAAAGACCAGGCATAAGCCCCCTTTTCTTCAACCAGAAGATTGCGGCAAATGAACTAG 14419
Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA------ATTTG 93257
| ||||| | || || || ||||||||||| || | ||||| ||||| ||| |
Sbjct 14418 AGAAAAAGAGTCCCTCAACAGCTGCAAATGCGACGAGCCGTTCCGCAAACGTATGATTGG 14359
Query 93258 CGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTG 93317
| |||| ||||||||| |||||||| ||||| || |||| |||| | |
Sbjct 14358 CCGAATC------GATCCATTTCAAAGCCCATGTTGCTTTATTGGCAATAGAAGGGATGG 14305
Query 93318 TTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTA 93377
||||||| ||| ||||| || | | | | || | | | || || || | ||| |
Sbjct 14304 TTTCGATGGCGGAAAATAAGTGGTTTTGTTGTTCGGTGTTGGGAATATAGGTTTGGATAA 14245
Query 93378 ACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC 93437
|| ||||||||| || ||||| | ||| ||||| ||||| || ||||||||||| |
Sbjct 14244 GCAAAGAATACATCTCCGAATGAATATTTTCCATCATGATTTGAAAGCCGTAGAAACAAC 14185
Query 93438 TAGCTTCCGTGATCTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATA 93496
|||||| | | | || || ||| ||||| || ||| | ||||||||||| |||
Sbjct 14184 GAGCTTCAGGAAGTTTAACCTC-GGAGCAAAATTGCTGTACTAAGTTTTCATTGACAATA 14126
Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT- 93555
|| || | || ||||| || || | | | | | || || ||||||| ||
Sbjct 14125 CCGTCCGCCGCAGCAAAGAACGCAATAACACGACAAACGAAGTGACGTTCATCATTATTG 14066
Query 93556 -AAGCT-TATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAAC 93613
|||| ||| ||| || ||||| || ||||| |||||||| || ||||||||
Sbjct 14065 AGAGCTGTATTCCAGTCCTTGTTGTCTTTGGAGAGATCCACTTCTTCCACTGTCCAAAAA 14006
Query 93614 GATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
||||| | || |||||||||| ||||| ||
Sbjct 14005 GATGCCACAGCCTTTTTGTACAGTTCCCAAAT 13974
>seq1520
Length=48961
Score = 138 bits (152), Expect = 1e-27
Identities = 371/556 (67%), Gaps = 21/556 (4%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATTGCTGAATGTT 93148
||| ||||||||||| || | ||||| || || ||||| | || || || ||
Sbjct 6189 GCATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATA--AGTTCGTTTGAAAAGGTC 6246
Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208
|| || || || | ||| ||||| |||| ||||||||| | || ||| || || |||
Sbjct 6247 AACCCAGGCAATAATCCACGTTTTTTGATCCAAAATATGCACGCGAAAGATCCGGAGAAA 6306
Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC-GGAATTACT 93267
|| || ||||| | ||||| ||||| || | ||||| ||||| | | || ||
Sbjct 6307 AAAATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTGATCGTCT 6366
Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
| ||||||| ||| ||||| | ||||||| ||||| ||||| | ||||||||||
Sbjct 6367 TC-GATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGA 6425
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
| || | | | ||| ||| | |||| | || || || | || | || ||| ||
Sbjct 6426 ACTGAACAAGAATGATCGTTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGAGTA 6485
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAAT--TTGGAATCCGTAGAAACATCTAGCTTCC 93445
|||| ||||||| || ||||| || | |||||||| ||||| ||| ||| ||
Sbjct 6486 AGTTTCTGAATGGATGTTTTCCAT--CATTGACTGGAATCCATAGAAGGATCGAGCCTCA 6543
Query 93446 GTGATCTGCACTTCTTGAGA-AAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504
| || ||| | ||| ||| || | | | || ||||| || || ||||| |||||
Sbjct 6544 GCGACCTGAATTTCACTAGAGAAGTGACGGATCAAG-TTTTCGTTTACAATACCGTCGGA 6602
Query 93505 TGCTGCaaaaaaaGCCAATATATG---CTTTATAAAATGTTTCTCATCATCTTTAA---G 93558
|| || ||||| || | | | | | | | ||| | ||| | | || | |
Sbjct 6603 CGCAGCGAAAAATGCTAGCACACGAGCCGTGAAAAAGCG---CTCGTTTGCGTTCATGCG 6659
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
|| | ||| ||| | ||| |||||||| || | ||||||| |||||| || || ||
Sbjct 6660 GTTGTTCCAGTCGTGCAAATCGTTTGAAAGGTCTATTTCTTCGGTAGTCCAGAAGGAAGC 6719
Query 93619 TTCTGCTTTTTTGTAC 93634
|| ||||||||||||
Sbjct 6720 CTCAGCTTTTTTGTAC 6735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556839618407320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |