Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq886 212 1e-49 >seq886 Length=61200 Score = 212 bits (234), Expect = 1e-49 Identities = 324/457 (71%), Gaps = 11/457 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || ||||| ||||||||||| ||||| || || ||||| || | | ||| | Sbjct 12076 CTCGCGTTCTTTGCCGCCTCTGATGGCATTGTTAACGAGAATCTTCTCGAACGCTTCTCG 12135 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || ||| | |||||| || ||||||||||| |||||||| || |||||| Sbjct 12136 AACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGATGGAGAAC 12195 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||||||| ||| | || || |||| |||||| || || ||||| ||| Sbjct 12196 ATTCACTCTGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTCGAACGT 12255 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || || | || || ||||| || || ||||||||| ||||| || ||||| Sbjct 12256 GATTTCCTTTTTGATGCTATCGAGACCATTCCTTGCATCAAGCGCAAGGCCGAGTGGGCT 12315 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCA-ACG---TTCGGCGAGAGGCTGGTAGCCTTTAC 42718 || ||||||| ||| || ||| || ||||||||| | || ||||||||| | Sbjct 12316 CTGCGCTGGATC---AGTGATGA-GCACTCGGTTTTCGGCGAGCGTCTCGTAGCCTTTGC 12371 Query 42719 CGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA 42778 || || || ||||| |||||||| ||| ||||||| |||||||| ||| | ||| || Sbjct 12372 TGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGAAGAAGCG 12431 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 | | ||||| || | | ||||| ||||| |||||||| | || ||||| |||| Sbjct 12432 TGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGGGTATGCA 12491 Query 42839 TAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 || ||||| |||||||| || ||| ||||||||| Sbjct 12492 TACCGACTTCGCCTGCCTTCTTTTC---AGCCACCTC 12525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944303279697680