Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1582 107 2e-18 >seq1582 Length=47868 Score = 107 bits (118), Expect = 2e-18 Identities = 211/302 (70%), Gaps = 14/302 (5%) Strand=Plus/Minus Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATC-GTGCGGATTATTTTTTAT----TAAAT 20468 || ||||| || | ||| || ||||||||||| ||| ||||| | ||| || | || Sbjct 5369 GGATTCCAAGCGCTCATGATTATTCTTCTATCAGTG-GGATTCTCTTTAATCTTCTGGAT 5311 Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528 || | ||| |||||| |||| || || || |||||||| | || |||| || Sbjct 5310 GCA---TTCACG-CAATTGATCAACGCCTTGTCCAGTATAGTCTCCGTCGCAGTCCTTGT 5255 Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTC 20588 || | || || || || ||||| ||||| || || ||||| ||||||||||| || | | Sbjct 5254 ACTCTGCGCCGAAATGTCTCCATTGGAATCCATACACAGGACCCAAATCCCCTTCACGCC 5195 Query 20589 TGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 | ||| |||| || || || ||| ||| | | || || ||| ||||||||||||| Sbjct 5194 TATGCCCCAGTCCACGGCCTTCCAAGAAGGCTTTCGAACCGTTTCCATCCCATATCTTGA 5135 Query 20649 CTCCTGTTCT-TGA-AAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTC 20706 | || |||| || ||| | | |||| || |||| || | | ||||| ||||| || Sbjct 5134 CGCC-CTTCTGCGACAAGAT-CGTGGAATCGGTACAGCCATGGACGAACCAGAGCAGTTC 5077 Query 20707 TT 20708 || Sbjct 5076 TT 5075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441356011282120