Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 150 4e-31 seq2933 123 6e-23 seq886 107 5e-18 seq2786 100 7e-16 seq2556 89.7 1e-12 >seq1 Length=474241 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||||| || |||||||||||||||||| || | Sbjct 254368 CCACCACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAA 254309 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||||| || ||||| || ||||| ||||| ||||| | ||| Sbjct 254308 AGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGG 254249 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || || || ||||| || || || | ||| ||| || || Sbjct 254248 ATACCCTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACC 254189 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | ||||| ||||| ||||||| ||||||||| || ||||||||| Sbjct 254188 TCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCATT 254141 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || |||||||| | ||||| || || || || || || ||||| || ||| Sbjct 254560 TCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTGCTTTCCAGCAAAG 254501 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||||||| || || |||||||| ||||| || || || || || || Sbjct 254500 ATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACATTG 254441 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || || || ||||||||||| ||||||| ||||| || Sbjct 254440 TCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCGGTCAATGTCTTCACA 254381 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 254380 AAGATCTGCAT 254370 >seq2933 Length=244213 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || ||||| || || | |||||||| || || || || || || || || || Sbjct 207794 TCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 207735 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| ||||| | || || ||||| || |||||||||||||| || || || Sbjct 207734 ATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTTGACATTG 207675 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || ||| || || || || ||||||||||| || || || ||||||||| Sbjct 207674 TCAATAGTGTCAGACGACTCGACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGACG 207615 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 207614 AAGATCTGCAT 207604 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| |||||||| || || || || || || || || || Sbjct 208022 TCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 207963 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || | || || || || || |||||||| ||||| || || || Sbjct 207962 ATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTTACATTG 207903 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||| || || || || || |||||||| || || || ||||||||| Sbjct 207902 TCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTGCCTGTGAGGGTCTTGACG 207843 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 207842 AAGATCTGCAT 207832 >seq886 Length=61200 Score = 107 bits (118), Expect = 5e-18 Identities = 138/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 269150 TGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCT 269209 ||||||||||||| || | ||| |||||||||||| || || || ||||| | Sbjct 12673 TGATCGGTATGAACGCAACATTGATGTGTCAATATATCGAGTTTGTTGCCGATCGACTAC 12732 Query 269210 TCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 || || ||||| | |||| ||||||| |||| ||| ||||||| ||||||||| Sbjct 12733 TCGTCGCTCTCGGCAACAAGAAGTTGTACAACTCGACGAACCCCTTCGACTTTATGGACA 12792 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA-TCAACGT 269328 | || |||||| |||| ||||| ||||| || || ||||| || ||| || |||| | Sbjct 12793 TGATCTCGCTCCAAGGGAAGACAAACTTTTTTGAGAAGCGGGTGTCCGATTACTCAAAG- 12851 Query 269329 CCTGGTGT 269336 ||||||| Sbjct 12852 GCTGGTGT 12859 >seq2786 Length=9315 Score = 100 bits (110), Expect = 7e-16 Identities = 137/191 (72%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| || |||| ||||||| || || || || || || || || || Sbjct 1548 TCCTTCTGAATATTGTAATCGG---GCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 1604 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || | ||||| || || || |||||||||||||| || || || Sbjct 1605 ATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATTTTCGCCTTTACATTG 1664 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | | || || || || || |||| ||| || || || ||||||||| Sbjct 1665 TCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTTTCCTGTGAGGGTCTTGACG 1724 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1725 AAGATCTGCAT 1735 >seq2556 Length=115598 Score = 89.7 bits (98), Expect = 1e-12 Identities = 190/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 268483 CTGTGGAACATGTACAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAGTT--CCTC 268540 || ||| | ||||||||||| |||| ||| | || |||||| | || || || |||| Sbjct 99042 CTATGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTC 98983 Query 268541 TTAACGCA-GACGTTGCAGACTGGCGTGAGAAACTGAACAACGATGAACGACACTTCATC 268599 || || || ||| |||||| ||| | | ||||| || || || || |||||| Sbjct 98982 ---ACTCATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATC 98926 Query 268600 AAACATATTCTGGGGTTCTTTGCAGGCTCCGACGGTATCGTGATGGAAAATCTTCAGACA 268659 | ||| | || | |||||||| | ||| ||||||||||||| |||||||| | Sbjct 98925 ACCCATGTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAG 98866 Query 268660 AACTTTGGTGTCGAAGTGATGGCACCAGAGGCACGACAATTCTATGCATATCAAACATTC 268719 |||| ||||||| ||| | ||||| || | || |||| | |||| | | Sbjct 98865 CGCTTTTCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATG 98806 Query 268720 AACGAATCCGTTCATAGTGAAATGTATGCACTTCTTATCGA 268760 | ||| ||||||| ||||| || | || |||||||| Sbjct 98805 ATGGAAAACGTTCATTCTGAAACTTACTCTCTGCTTATCGA 98765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179608407118154