Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13]
3,043 sequences; 40,928,581 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 1e-13
>seq1
Length=474241
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || |||||||| ||||| | ||||| ||||| | || || || | |
Sbjct 254563 GACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTGCTTTCCAGCA 254504
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
|||| | |||||||||||| ||||| || ||||||||||| ||| | |||| ||
Sbjct 254503 AAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTC-CTGAATCTTTGCCTTGAC 254445
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | ||||| | ||||| ||||| | || | ||| || || |||| || |
Sbjct 254444 ATTG-TCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCGGTCAATGTCT 254386
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| ||||||||
Sbjct 254385 TCACAAAGATCTGCAT 254370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496243523418960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |