Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq2933 109 5e-19 seq2786 91.5 1e-13 >seq1 Length=474241 Score = 120 bits (132), Expect = 3e-22 Identities = 156/212 (74%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 126904 CACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGT 126962 |||||| ||| | ||||||||||| ||||| || || || | ||| ||| ||| | Sbjct 254580 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 254521 Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022 | | ||| |||||||| ||||||| ||||| || |||||||| ||||| || |||||| Sbjct 254520 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCC- 254462 Query 127023 TGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||| | | || ||||| | |||| ||||| | | |||||| || | || | ||| Sbjct 254461 TGAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTC 254402 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||| || || ||||| |||||||| Sbjct 254401 TTTCCGGTCAATGTCTTCACAAAGATCTGCAT 254370 >seq2933 Length=244213 Score = 109 bits (120), Expect = 5e-19 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | ||||| ||| || ||||| || ||| Sbjct 207572 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCA 207513 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||| || ||||||||||| ||||||||||| ||| || || ||| Sbjct 207512 GCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGTATCTTGGCCTTC 207453 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | | |||||| || | || | ||||||||| || || || Sbjct 207452 ACGTTG-TCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTGCCCGTGAGGGT 207394 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || ||||| || |||||| || Sbjct 207393 CTTAACAAAGATTTGCATGCCT 207372 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||||||| | ||||||| ||| || | ||| || ||| Sbjct 208028 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 207969 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | || | |||||||| || || || ||||||||||||||| ||| ||| ||| Sbjct 207968 GCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTT 207909 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||||| ||| || || | || | ||| ||||| || || || Sbjct 207908 ACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTGCCTGTGAGGGTC 207849 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 207848 TTGACGAAGATCTGCAT 207832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| |||||||||||||| | ||||||| ||| || | ||| || ||| Sbjct 207800 GTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 207741 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | || | || || || || || || || || ||||||||| ||||||| |||| Sbjct 207740 GCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTTG 207681 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | |||||| || | || | ||| || || || || || Sbjct 207680 ACATTGTCAATAGTGTCAGACGACTCGACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTC 207621 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 207620 TTGACGAAGATCTGCATGCCT 207600 >seq2786 Length=9315 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||||||||||||| | |||||| ||| || | ||| || ||||| | Sbjct 1547 CTCCTTCTGAATATTGTAATCGGGC---GTGCGACCATCCTCCAACTGCTTGCCAGCAAA 1603 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 || | |||||||| || || || || |||||||||||| ||||||| ||| | | Sbjct 1604 AATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATTTTCGCCTTTACATT 1663 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | |||||||| ||| || || | || | || || || || || || || || Sbjct 1664 GTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTTTCCTGTGAGGGTCTTGAC 1723 Query 127102 AAAAATCTGCATGGCT 127117 || ||||||||| || Sbjct 1724 GAAGATCTGCATGCCT 1739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475482713138320