Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq2933 86.0 6e-12 >seq1 Length=474241 Score = 104 bits (114), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || |||| || ||||| || || || || || || || ||||| || | || | Sbjct 254585 AGACTCACCA--AGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGA 254528 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| ||||| || ||||| || | ||||| || || ||||| || |||||||||||| Sbjct 254527 CCATCCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCT 254468 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 || || ||||| ||| |||| || | ||||| ||||||||||| || ||||| Sbjct 254467 TTGTCCTGAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTG 254408 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | ||| || ||||| | || || ||||| || |||||| Sbjct 254407 ATCGTCTTTCCGGTCAATGTCTTCACAAAGATCTGCATC 254369 >seq2933 Length=244213 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | || || || || ||||| ||||| || || || || || Sbjct 207605 ATGCCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCA 207546 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | || | |||||| || || || Sbjct 207545 GAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAGATTAGTCGTTGTTGATCGGGA 207486 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || ||||| || || || || | || | || | ||||| |||||||| Sbjct 207485 GGAATGCCCTCCTTATCCTGTATCTTGGCCTTCA-CGTTGTCGATCGTGTCTGAAGACTC 207427 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | ||| | ||||||||| || || || || ||||| |||||||| Sbjct 207426 GACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 207376 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || |||| || || || || || || ||||| ||||| || |||||| | || | Sbjct 208047 AGACTCACCA--AGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGA 207990 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| ||||| || || || || | || | || |||||||| ||||||||||| || Sbjct 207989 CCATCCTCCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCC 207930 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 || || || || || || | || | |||||| || ||||| || || |||||| Sbjct 207929 TTGTCCTGGATCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTA 207870 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||| ||||| || || || || || || || ||||| Sbjct 207869 ATCGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 207832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451986006928280