Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2556 194 2e-44 seq886 188 7e-43 seq1520 154 1e-32 seq2933 102 8e-17 >seq2556 Length=115598 Score = 194 bits (214), Expect = 2e-44 Identities = 379/552 (69%), Gaps = 11/552 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA--AGTCA 132952 || || || ||| ||| || || || || | | ||||| ||||| |||| ||| | Sbjct 98486 CACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTT--TGAATAAGTTA 98543 Query 132953 AGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGA 133012 ||| ||||| |||||||| || || | ||| || |||| ||||| || ||||| | Sbjct 98544 GGCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAA 98603 Query 133013 AGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC-TTTGCTG 133071 ||| |||||||| || ||||| ||||||| | ||| | || ||| |||| |||| Sbjct 98604 AGATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTG-CTTCGTTTGTCA 98662 Query 133072 GCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCG 133131 | ||||| || ||||| ||||| || |||| |||||| || ||||| || ||| Sbjct 98663 GATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCG 98722 Query 133132 TTCAACAAACG-GAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATA 133190 | || | | | | | || || | ||||| || ||||| || || || Sbjct 98723 TCGAAGAGATATGCGCGTTGATTAAGATCCTTG-ACGTATGTATCGATAAGCAGAGAGTA 98781 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 |||| || || ||||| ||||| ||||| || || |||||| | |||||||| | Sbjct 98782 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 98841 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | |||||||| | | || ||||| | |||||||||||| ||||| ||||| ||| Sbjct 98842 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 98901 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC--- 133367 ||| || || || || || || |||||||||| ||||||| | ||| || ||||| Sbjct 98902 GGCAAAGAATGCAAGGACATGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGTT 98961 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| || | | ||||| | ||| || |||||| ||||| || || || Sbjct 98962 CCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTGC 99021 Query 133428 TTTTTTGTACAT 133439 ||| |||||||| Sbjct 99022 TTTCTTGTACAT 99033 >seq886 Length=61200 Score = 188 bits (208), Expect = 7e-43 Identities = 380/556 (68%), Gaps = 17/556 (3%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| || |||||| ||||| ||||| || | ||||| ||||| ||| | ||| Sbjct 12507 GCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAA 12448 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 ||| ||||| | || || || || | |||||| |||| ||||| ||| || ||||| Sbjct 12447 GCCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAA 12388 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA---CGTGGCTTCTTTGCT 133070 | ||| || || || || || || || || ||||||||||| || | || | || Sbjct 12387 AATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGCTCATCACT 12328 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||||||||| ||||| |||||||| |||| ||| || || || ||||| || Sbjct 12327 G---ATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATGGTCTCGATAGC 12271 Query 133131 GTTCAACAAACGGAGTTTCTCTTCCGA--GGAACGC--ACGTAGGTGTCGATGAGGGTCG 133186 | ||| || ||| | | | | ||| || | | ||| ||||||||||| | Sbjct 12270 AT-CAAAAA--GGAAAT-CACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAG 12215 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 | || | || ||||| | ||||||||| || || || ||||| ||||| || |||| Sbjct 12214 AGTAAGTCTCAGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGTGCCT 12155 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | | ||||| ||||| | | ||| || |||| ||||| ||||| || ||||| || Sbjct 12154 CAGCGACCTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTAACAATGCCATCAG 12095 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-- 133364 |||||| || || || || || | |||||| || ||| |||| |||| ||| Sbjct 12094 AGGCGGCAAAGAACGCGAGGACACGGGAGATGAAGAATCGTTCGCTGTCATTCAGGCGGT 12035 Query 133365 -CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 | |||||| | ||| || || | |||| ||| || | ||||| || || |||| Sbjct 12034 TGTTCCAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCT 11975 Query 133424 CGGCTTTTTTGTACAT 133439 |||| || |||||||| Sbjct 11974 CGGCCTTCTTGTACAT 11959 >seq1520 Length=48961 Score = 154 bits (170), Expect = 1e-32 Identities = 385/577 (67%), Gaps = 21/577 (4%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||| || | ||| ||||||||| |||| || || || | | || |||||||| Sbjct 6179 TGAAGATAAGGCATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTT-- 6236 Query 132944 TGAAA--GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACT 133001 ||||| ||||| || |||| | || |||||||||| |||||||||| |||||| Sbjct 6237 TGAAAAGGTCAACCCAGGCAATAATCCACGTTTTTTGATCCAAAATATGCACGCGAAAGA 6296 Query 133002 GCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGC 133061 || || || || | || |||| ||| | ||| || || || || || | ||||| | Sbjct 6297 TCCGGAGAAAAAAATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAAC 6356 Query 133062 TTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGT 133121 || | | ||||||| | || |||||| | || |||| ||| | ||| || ||||| Sbjct 6357 TTGATCGTCTTCGATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGT 6416 Query 133122 TTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGA--GGAAC--GCACGTAGGTGTCGA 133177 |||||| | | ||||| || | || | ||| ||| | | | || || | | Sbjct 6417 TTCGATAGAACTGAACAA---GA-ATGATCGTTCGAAGGGATCTTGGATATACGTTTGAA 6472 Query 133178 TGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATT---TGAAAGCCGTAAA 133234 | || || || |||| || || | ||| ||||| ||| || || || || | Sbjct 6473 TCAGCAAAGAGTAAGTTTCTGAATGGATGTTTTCCAT---CATTGACTGGAATCCATAGA 6529 Query 133235 AGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGA 133294 || | || ||||| | ||||| | ||| || ||| | || || |||||||| | Sbjct 6530 AGGATCGAGCCTCAGCGACCTGAATTTCACTAGAGAAGTGACGGATCAAGTTTTCGTTTA 6589 Query 133295 CGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGT 133354 | || |||||| || |||||||| || ||||| | ||||| ||||||||| Sbjct 6590 CAATACCGTCGGACGCAGCGAAAAATGCTAGCACACGAGCCGTGAAAAAGCGCTCGTTTG 6649 Query 133355 CGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCC 133411 |||||| ||| | ||||||| || || || || ||||| | || ||| |||| Sbjct 6650 CGTTCATGCGGTTGTTCCAGTCGTGCAAATCGTTTGAAAGGTCTATTTCTTCGGTAGTCC 6709 Query 133412 AAAACGACGCCTCGGCTTTTTTGTACATACTCCACAT 133448 | || || ||||| |||||||||||| | | ||| || Sbjct 6710 AGAAGGAAGCCTCAGCTTTTTTGTACCTTCGCCAGAT 6746 >seq2933 Length=244213 Score = 102 bits (112), Expect = 8e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || || || | || || ||| | | Sbjct 207832 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACGATTACTCTGGAGGTTGAGTCGTCG 207891 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 207892 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 207951 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || ||||| ||| |||| || | ||||| || ||| |||||| Sbjct 207952 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 208011 Query 38424 ATCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 ||||| ||||| |||| || || |||||| Sbjct 208012 ATCCAGAAGGAGTCGACTCTTCACCTTGGTG 208042 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || |||||||||||||| ||||| | || |||||| | | Sbjct 207376 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 207435 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || ||||| ||||| |||| || Sbjct 207436 GACACGATCGACAACG-TGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 207494 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 207495 ACAACGACTAATCTTCGCTGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAA 207554 Query 38423 CATCCAAAAGGA 38434 ||| || ||||| Sbjct 207555 CATTCAGAAGGA 207566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500153774677120