Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1103 104 9e-17 seq1 102 3e-16 seq1215 93.3 2e-13 seq2933 89.7 2e-12 seq2578 86.0 2e-11 seq1017 84.2 9e-11 >seq1103 Length=350735 Score = 104 bits (114), Expect = 9e-17 Identities = 243/364 (67%), Gaps = 7/364 (2%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||||||||| || || ||||| || |||||||||||||| || ||| || | Sbjct 87867 CCTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACTGCCGAAGCATTCCTC 87808 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | | | || | |||| | || |||||||| || |||||||| | ||||| Sbjct 87807 GGCACCACTATCACCAACTCAGTCGTGACCGTTCCCGCGTACTTCAATGACTCTCAACGT 87748 Query 451364 CAAGCAACTAAAGATGCAGGA--CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 || ||||| || || || ||| ||||| | || | ||||| || || || ||||| | Sbjct 87747 CAGGCAACCAAGGACGCCGGAACCATAT--CCGGAATGAATGTCCTCCGTATCATTAACG 87690 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || || || | || ||||| || | || ||| | | | || | Sbjct 87689 AACCAACTGCCGCGGCGATTGCTTATGGCCTTGACAA---AAAGGTGTCTGGCGAGCGTA 87633 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 || | || | || ||| | || ||||||||| ||| ||| || | | || |||| Sbjct 87632 ATGTCTTGATTTTCGATCTGGGAGGAGGAACTTTCGATGTTTCCCTATTGACGATCGAAG 87573 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 | || | || ||||| || || || |||||| || ||||| || ||||| || ||| Sbjct 87572 AAGGTATTTTCGAAGTCAAAGCCACTGCTGGTGACACCCATCTTGGCGGTGAGGACTTTG 87513 Query 451602 ATAA 451605 | || Sbjct 87512 ACAA 87509 >seq1 Length=474241 Score = 102 bits (112), Expect = 3e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||| || || || || || | || || || || || Sbjct 254141 AATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTC 254200 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || ||| ||||| |||||||| || || |||||||| || Sbjct 254201 TGATACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 254260 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||| | || || | || || || || |||||||| | ||| | |||||||||| Sbjct 254261 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 254320 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | || || | || ||||| Sbjct 254321 TATCCAAAAAGAATCGACTCTTCA 254344 >seq1215 Length=190718 Score = 93.3 bits (102), Expect = 2e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || || || |||||||| || ||||| ||||| || ||||| || Sbjct 137570 GCTGTTATCACGGTCCCTGCCTACTTCAATGACGCCCAACGTCAAGCCACGAAAGACGCT 137629 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || ||||||||| | |||||||||| | || ||||||||||| || || || | Sbjct 137630 GGTCAGATTGCTGGTCTTGATGTTCTTCGTGTCATCAATGAACCTACGGCTGCCGCATTG 137689 Query 451442 GCATATGGACT 451452 || ||||| || Sbjct 137690 GCCTATGGTCT 137700 >seq2933 Length=244213 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || || || ||||| || ||| | || || || || || Sbjct 207376 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 207435 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || || |||||||| || |||||||| |||||| Sbjct 207436 GACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAA 207495 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| |||| ||| | || || || || ||||||||| | || | | || || || Sbjct 207496 CAACGACTAATCTTCGCTGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAAC 207555 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| |||| |||||| Sbjct 207556 ATTCAGAAGGAGTCAACCCTTCAC 207579 >seq2578 Length=112811 Score = 86.0 bits (94), Expect = 2e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 391155 ATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 ||||| ||||||||||||||||| || ||| | || || ||||| ||||||||| ||||| Sbjct 100679 ATTCCCCCTGATCAACAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACT 100738 Query 391215 TTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 | | || ||||| ||| | ||||| | || || ||||| ||| Sbjct 100739 CTTTCCGACTATAACATTCAGAAGGAATCGACGCTCCACTTGGTA 100783 >seq1017 Length=59083 Score = 84.2 bits (92), Expect = 9e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 391153 GAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA 391212 ||||||| ||||||||||| || | |||||| | || ||||||||||| |||||| | | Sbjct 44626 GAATTCCCCCTGATCAACAGCGACTCATTTTCGCTGGAAAACAACTTGAGGATGGACGTA 44567 Query 391213 CTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 || || ||||| || ||| | || || | || ||||||||||| Sbjct 44566 CTCTGAGTGATTACAACATTCAGAAAGAATCCACCCTTCACTTAGT 44521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975641369826644