Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1103 172 7e-38 seq1379 93.3 5e-14 seq2765 87.8 2e-12 seq2378 82.4 1e-10 >seq1103 Length=350735 Score = 172 bits (190), Expect = 7e-38 Identities = 279/395 (71%), Gaps = 10/395 (3%) Strand=Plus/Minus Query 7333 AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 ||||| || | ||| || |||||||| || ||| || ||| | || ||||| | | Sbjct 202048 AGATAGTGTCCTCTTGGCACGCTCACAAGCACTTCTTAGACGTCTGAGTGCACGGGCATC 201989 Query 7393 ACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT-CGAAG-GAGT 7450 | ||||||| || ||| || ||||||||||| | ||||||| | ||| | || Sbjct 201988 ATCGGAAATGTCGAGCTTTGACTTGCGTTTAAACTCGTTCTTGAAGTGTTCCAAGAGGGT 201929 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 | | || || || ||||||||||| || || || || || ||||| ||||| | ||| Sbjct 201928 GTTG--TCAAAGTCCTCACCACCCAAATGAGTGTCACCAGCAGTCGCCTTGACAGCGAAG 201871 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 | ||| || || || || | |||||||| || || ||||| |||| || |||||| Sbjct 201870 ACACCGCCGCTGATATTCAAAAGGGAAACATCGAAAGTTCCACCTCCCAAATCGAAAATG 201811 Query 7571 AGTACGTTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCC 7627 || |||||| | ||| || |||| | | | ||||||||||| || ||||| || || Sbjct 201810 AGGACGTTCTTTTCG--GTTTTTGAT-TGACGGTCGAGACCGTAAGCAATAGCGGCAGCA 201754 Query 7628 GTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTC 7687 ||||| ||||| || ||||| ||| | |||||||| |||| | || ||||| || Sbjct 201753 GTTGGCTCATTGATGATACGGAGAACATCGAGGCCAGCGATAGCACCAGCGTCTTTTGTT 201694 Query 7688 GCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || | || || || ||||| |||||||| || || Sbjct 201693 GCCAGACGCTGAGAGTCGTTGAAGTAGGCAGGTAC 201659 Score = 143 bits (158), Expect = 3e-29 Identities = 247/356 (69%), Gaps = 2/356 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || ||||| || | || || || || || || ||||||||||| || |||||| Sbjct 87512 TCAAAGTCCTCACCGCCAAGATGGGTGTCACCAGCAGTGGCTTTGACTTCGAAAATACCT 87571 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | || | |||||||| || || || || ||||| || ||||| | || Sbjct 87572 TCTTCGATCGTCAATAGGGAAACATCGAAAGTTCCTCCTCCCAGATCGAAAATCAAGACA 87631 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || || || || || || || || ||||| || |||||||| Sbjct 87632 TTACGCTCGCCAGACACCTTTTTGTCAAGGCCATAAGCAATCGCCGCGGCAGTTGGTTCG 87691 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 ||||| ||||| || ||| |||| || | || ||| | || || || || || || || Sbjct 87692 TTAATGATACGGAGGACA-TTCATTCCGGATATGGTTCCGGCGTCCTTGGTTGCCTGACG 87750 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || || || ||||| || || || || ||||| | || |||| | | ||||| Sbjct 87751 TTGAGAGTCATTGAAGTACGCGGGAACGGTCACGACTGAGTTGGTGATAGTGGTGCCGAG 87810 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | | ||| || | |||||||||||| || |||||||| || || ||||||| Sbjct 87811 GAATGCTTCGGCAGTTTCTTTCATTTTGAGGAGGACCATCGAAGATATTTCTTCAG 87866 Score = 109 bits (120), Expect = 7e-19 Identities = 111/144 (77%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 7973 GGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTA 8032 |||||||| || ||||||||| || || || ||||||||||| || | | || Sbjct 88135 GGGTTCATCGCGACTTGGTTCTTTGCGGCATCACCGATAAGACGCTCTCCGT---CGGTG 88191 Query 8033 AACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGG 8092 || ||||| || || || |||||||| ||||||||||| || || |||||||| || || Sbjct 88192 AAGGCGACATAGGAAGGCGTCGTTCGGTTCCCTTGGTCATTGGCGATAATTTCAACTCGA 88251 Query 8093 TCGTTTTGCCAGACGCCGACGCAC 8116 ||||||||||| || ||||| ||| Sbjct 88252 TCGTTTTGCCACACACCGACACAC 88275 >seq1379 Length=51093 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 104974 TGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTC 105033 || || || ||||||||||| | ||||| || | | | | ||| | ||| |||||| | Sbjct 2623 TGATAAATCGTTTCGAATATCTGGATGTTTAGCTGTTTTGCTTCAACCGAATCGAATGGC 2564 Query 105034 ATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGA 105093 || |||||| ||||| || || || ||||| || ||||||||||| ||||| | || | Sbjct 2563 ATCTTTAACACCATAAAGACATCGGCAAGACCTTGCACACCAATACCAATGGGACGGTTA 2504 Query 105094 CGCATATTTGAACG 105107 |||||||| || || Sbjct 2503 CGCATATTCGACCG 2490 >seq2765 Length=9663 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/226 (70%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 105850 GCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCT 105909 ||| | || ||||| ||||| | ||| | ||||| || ||||| | || | ||| Sbjct 3879 GCCGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCCTAGATACCTTGGAGAGAATCA 3938 Query 105910 TCCTTATTCGCAATCAGGAAA-CACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAA 105968 || || | |||| |||| || || ||||||||||| || || ||||| |||||||| Sbjct 3939 TCTTTCAT-GCAAACAGGGAAGCATGATGACATTTGAGGCAAAGGGGTACCGGCATTGAA 3997 Query 105969 CAGAGTTGGTGTTGCATGAATGAACAAACCTTTCG---ATAACGCTTCGTATGTTTCCAG 106025 ||||| || || ||||| || ||| | | ||| || | | | ||| |||| || Sbjct 3998 GAGAGTGGGAGTGGCATGGGTG-ACATATCGCTCGGACATGAGGAT--GTAAGTTTGCAA 4054 Query 106026 GACGTGATCAATATCGT-GTCCATGAATACCAATAGCGACGCGCAT 106070 ||| || |||||||||| || || || |||| |||||| ||||| Sbjct 4055 GACATGCTCAATATCGTCCCCCGTGTATCCCAAGAGCGACCCGCAT 4100 >seq2378 Length=298442 Score = 82.4 bits (90), Expect = 1e-10 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 ||||| || ||||| ||||| || | |||||| ||||| ||| || | | ||| | Sbjct 270765 TTACCGATTGCATCGATTTCGTCGACAAAGATGATACAAGGTGCATGCTTTCTTGCTGAA 270706 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGAC 11568 |||| | ||||||||| | | || || || ||||||||||| ||||| |||| Sbjct 270705 GCAAAAAGATCACGGACGCGGGACGAACCAACACCGACAAACATTTCGACGAATTCTGAC 270646 Query 11569 CCCGAACACTG-AATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGT 11627 || | | |||| || || |||||||||| ||||| || | || || | | || Sbjct 270645 CCAG-ATACTGAAAGGAACGGAACGGAAGCCTCACCGGCAGTGGCTTTGGCAAGCAAAGT 270587 Query 11628 TTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||| ||||||||| ||| | || | ||||| | || ||||| || || Sbjct 270586 CTTACCGGTACCTGGTGGACCAGATAGAATGGCACCACGAGGAATTTTGGCCCC 270533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635108641136120