Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1368 84.2 3e-11 seq777 84.2 3e-11 >seq1368 Length=51257 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG 110161 |||| || ||||| |||||||||| |||||||| || | ||||||||| || || | Sbjct 43049 CATCAGCGAGACCTTGAACACCGATGCCAATGGGACGGTTACGCATGTTAGATCGACGGG 42990 Query 110162 CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCT 110221 | | |||||| ||||||| || ||||| |||||||| || || || |||| Sbjct 42989 CCTCAGGAATGGGGTAGTAGTTGCGATCAATGACGCGATTGAGGTTGAAAGTGACCGTCT 42930 Query 110222 TCGTGATTTCATGGAGTTT 110240 |||| | ||||||||||| Sbjct 42929 TCGTAACATCATGGAGTTT 42911 >seq777 Length=200876 Score = 84.2 bits (92), Expect = 3e-11 Identities = 188/278 (68%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 110861 TGGCACGAATGTCGTGGATATGC--ATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 |||| || |||| || ||||| || || || ||||| || | || || || || Sbjct 114981 TGGCCCGGATGTTATG--TATGCTAATTCCTATGCCACCGGCTGATTTGCTGATCAAAGC 114924 Query 110919 ACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAA 110978 ||| | | | || ||| | || ||||| || || ||||| | || || || || || Sbjct 114923 ACAGTTTTTCAGGGTATCGTAGATACCTTCGATAGAATCATCTTTCATGCAAACAAGGAA 114864 Query 110979 GCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAAT 111038 ||| || ||||| ||||| ||| || || ||||||||||| || || || |||||| | Sbjct 114863 GCATGAGGACATTTGAGGCGAAGGGGTACCGGCATTGAAGAGAGTGGGAGTGGCATGAGT 114804 Query 111039 GAACAGACCTTGGGACATCTTGTTGTATGTGT-CGAGTGCGGAGGGTACATCTTTACCGT 111097 ||| | | |||||| ||||||||| | | || | | | ||| | |||| Sbjct 114803 GAAATATCGCTCGGACATGAGGTTGTATGTTTGCAAGACATGCTCG-ATATCGTCTCCGT 114745 Query 111098 GAATACCAATGGCAACTCGCATGAACATATATTGAGGC 111135 | || |||| || || ||||||| ||||| ||| ||| Sbjct 114744 GTATCCCAACAGCGACCCGCATGATCATATGTTGTGGC 114707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588953596825400