Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq777 84.2 3e-11 seq2440 82.4 9e-11 >seq777 Length=200876 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 |||||||| | ||| || || || || || | ||||||||| |||||| || || Sbjct 114904 TAGATACCTTCGATAGAATCATCTTTCATGCAAACAAGGAAGCATGAGGACATTTGAGGC 114845 Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGGACAT 107232 || ||||| ||||||||||| || || || || ||| |||| ||| | | |||||| Sbjct 114844 GAAGGGGTACCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAA-ATATCGCTCGGACAT 114786 Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292 || |||||| | ||||||| || || || || ||||| || || | || || || Sbjct 114785 GAGGTTGTATGTTTGCAAGACATGCTCGATATCGTCTCCGTGTATCCCAACAGCGACCCG 114726 Query 107293 CATAAACATGTATTGGGG 107310 ||| | ||| | ||| || Sbjct 114725 CATGATCATATGTTGTGG 114708 >seq2440 Length=22844 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| || || ||||||||||| || | || || ||||| || |||| ||| Sbjct 14509 CCCTCATCACGACTGATGAGTTCATTTGAAAACGAAAGACCAGGCATAAGCCCCCTTTTC 14450 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 |||||||| | || ||| ||||| | ||||| |||| ||||| ||| ||||| Sbjct 14449 TTCAACCAGAAGATTGCGGCAAATGAACTAGAGAAAAAGAGTCCCTCAACAGCTGCAAAT 14390 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCCCATTTC 117471 || | || || || || || | || | || | |||||||| |||||| | Sbjct 14389 GCGACGAGCCGTTCCGCAAACGTATGATTGGCCGAATCGATCCATTTCAAAGCCCATGTT 14330 Query 117472 GCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTT 117521 || || || ||||| | || | |||| |||||| |||||| || || Sbjct 14329 GCTTTATTGGCAATAGAAGGGATGGTTTCGATGGCGGAAAATAAGTGGTT 14280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589958358605320