Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-36 seq2933 152 1e-31 seq2786 131 4e-25 seq2578 84.2 5e-11 >seq1 Length=474241 Score = 168 bits (186), Expect = 1e-36 Identities = 164/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| |||||||| || |||||||| ||||| ||||| | |||||| | |||||||| Sbjct 254351 AACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTC 254292 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || |||||||| ||||||||||| ||||| || || || || || || Sbjct 254291 TAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTG 254232 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| ||| ||| || || |||||||| || || ||||| || | ||| | ||||| Sbjct 254231 AATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTCTT 254172 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| |||||||| || || || | |||||| Sbjct 254171 TCCGGTCAAAGTCTTGACAAAGATCTGCATT 254141 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| ||||| || |||||||| ||||| || || || | ||| || | ||||| || | Sbjct 254577 CAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCA 254518 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| || || ||||| | || |||||||| |||||||||||||||||||| |||| Sbjct 254517 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAA 254458 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | ||| |||||| || || || ||||| ||| || || ||||| || | |||||||| Sbjct 254457 TCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTC 254398 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || || || | ||||| Sbjct 254397 CGGTCAATGTCTTCACAAAGATCTGCAT 254370 >seq2933 Length=244213 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || |||||||| |||||||||||||| | ||| || | ||||| || Sbjct 207812 ACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCC 207753 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || || || || || ||||||||||| || ||||| ||||| ||||| || Sbjct 207752 AACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGG 207693 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| |||||| || ||||| ||||| || || || ||||| || | ||||||| Sbjct 207692 ATTTTCGCCTTGACATTGTCAATAGTGTCAGACGACTCGACCTCAAGAGTGATCGTCTTT 207633 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 207632 CCCGTGAGTGTCTTGACGAAGATCTGCAT 207604 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| || ||||| || ||||| ||||| || | ||| || | |||||||| Sbjct 207585 AACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTC 207526 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| ||||||||||| || ||||||||||| || || || || Sbjct 207525 GAGCTGCTTGCCAGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTG 207466 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| ||||| || || ||||| ||| || || || | || | ||| || Sbjct 207465 TATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTT 207406 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 207405 GCCCGTGAGGGTCTTAACAAAGATTTGCAT 207376 Score = 141 bits (156), Expect = 2e-28 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||| ||||| || || || |||||||||| ||| || | ||||| || | Sbjct 208039 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCA 207980 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| || || || || || || || ||||| || |||||||| || ||||| || | Sbjct 207979 ACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGA 207920 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| || || |||||||||||||| || || || || |||| |||||| | Sbjct 207919 TCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTGC 207860 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| | || || ||||| | ||||| Sbjct 207859 CTGTGAGGGTCTTGACGAAGATCTGCAT 207832 Score = 111 bits (122), Expect = 3e-19 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||||||||| || |||||||| | |||||||| || || || Sbjct 207070 ACTAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATCCGAAAGAGTTCGTCCGTCCTCA 207011 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 || ||||| || ||||| || || |||||||||||||||||||||| Sbjct 207010 AGTTGCTTTCCAGCGAAAATCAGACGTTGTTGGTCTGGAGGAATGC 206965 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || ||||| ||||| |||| ||| |||| ||||||||| Sbjct 207356 ACAAGGTGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGACCATCTTCG 207297 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || || || ||||| ||||||||||| || || || Sbjct 207296 AGCTGCTTCCCCGCAAATATAAGACGTTGTTGGTCAGGTGGGAT 207253 >seq2786 Length=9315 Score = 131 bits (144), Expect = 4e-25 Identities = 154/208 (74%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||| | ||| || |||||||||||||||| | || | ||||| || | Sbjct 1531 CAAGGTGAAGAGTCGGCTCCTTCTGAATATTGTAATCGG---GCGTGCGACCATCCTCCA 1587 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| || || || || || || || ||||| || || || || || ||||| || | Sbjct 1588 ACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGA 1647 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 |||| ||| || || |||||||||||||| || || || || |||| || ||||| Sbjct 1648 TTTTCGCCTTTACATTGTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTTTC 1707 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| | || || ||||| | ||||| Sbjct 1708 CTGTGAGGGTCTTGACGAAGATCTGCAT 1735 >seq2578 Length=112811 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || || || || ||||| || || |||| |||||||| ||||||||||| || Sbjct 100777 GTGGAGCGTCGATTCCTTCTGAATGTTATAGTCGGAAAGAGTTCGTCCATCTTCGAGTTG 100718 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||| || |||||||| | |||||||| || || ||||| Sbjct 100717 CTTTCCGGCGAAGATCAAACGTTGTTGATCAGGGGGAAT 100679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109438343045981