Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 161 8e-35 seq2933 132 4e-26 seq2786 91.5 1e-13 >seq1 Length=474241 Score = 161 bits (178), Expect = 8e-35 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||||||||| ||||| || || || || || | | || | |||| ||||| || Sbjct 254573 ATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTG 254514 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||||||||||||| ||||| |||||||||||||| || ||||| || Sbjct 254513 CTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTT 254454 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || ||| | || | ||||||||| | || || |||||||||| ||| || ||||| Sbjct 254453 TGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCGGT 254394 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 254393 CAATGTCTTCACAAAGATCTGCAT 254370 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | |||||| || ||||||||||| ||||| ||||| | | ||| | | | Sbjct 254357 ACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCC 254298 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || ||||| || | ||| ||||| || || || || || || || Sbjct 254297 ATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTT 254238 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||| ||||| ||| || ||| | || | || ||||||| ||||| || | |||| Sbjct 254237 ATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAAGGTGAT 254178 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| ||||| || ||||| |||||||| Sbjct 254177 GGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 254142 >seq2933 Length=244213 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||||| | ||| | || | || ||||| || ||||| || ||||||||||| | Sbjct 207830 CCTCCTCGAAGACGAAGGACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAA 207771 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| ||||| ||||| || ||||| || | ||| ||||| || |||||| Sbjct 207770 AGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGA 207711 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || || ||||| || ||| | || | ||||||||||| || || Sbjct 207710 ATACCTTCCTTGTCCTGGATTTTCGCCTTGACATTGTCAATAGTGTCAGACGACTCGACC 207651 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||||| ||| || || || | || || || || ||||||||| Sbjct 207650 TCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGACGAAGATCTGCATG 207603 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || || || || |||||||||| | || | |||| ||||| ||| Sbjct 208034 TGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGC 207975 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | |||||| || || ||||||||||| || || || || || || Sbjct 207974 TTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTC 207915 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 |||||| | || | ||||| |||| || || || ||||| | ||| ||||| || Sbjct 207914 GCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTGCCTGTG 207855 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | || || || || |||||||| | | |||||| Sbjct 207854 AGGGTCTTGACGAAGATCTGCATACCTCCTCGAAGA 207819 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || ||| | ||| | |||||||| || || || || || ||||| || | Sbjct 207602 CCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAA 207543 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||||| || || || || | || ||||||||||| ||| Sbjct 207542 AGGGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAGATTAGTCGTTGTTGATCGGGAGGA 207483 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || ||||| || || || || || | || | ||||| || | || || Sbjct 207482 ATGCCCTCCTTATCCTGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACC 207423 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | ||||| ||||||||| || | || || ||||| || |||||| Sbjct 207422 TCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCATG 207375 >seq2786 Length=9315 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || | || || || ||||||||||||| || | |||| ||||| ||| Sbjct 1536 TGAAGAGTCGGCTCCTTCTGAATATTGTAATCGG---GCGTGCGACCATCCTCCAACTGC 1592 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | |||||| || || ||||| || || || || || || ||||| Sbjct 1593 TTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATTTTC 1652 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 |||||| | || | ||||| ||| || || || ||||| | || || || || Sbjct 1653 GCCTTTACATTGTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTTTCCTGTG 1712 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | || || || || ||||||||| | | |||||| Sbjct 1713 AGGGTCTTGACGAAGATCTGCATGCCTCCTCGAAGA 1748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396263703396351