Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq886 174 3e-38 seq2556 156 8e-33 seq2440 113 8e-20 >seq886 Length=61200 Score = 174 bits (192), Expect = 3e-38 Identities = 377/560 (67%), Gaps = 7/560 (1%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAA-GCAGA 48188 |||||| ||||| | |||| || || || || ||||||||| |||| ||||| || | Sbjct 12507 GCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAA 12448 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248 | |||||||| | || | || || | ||| || || | |||||| ||||||||||||| Sbjct 12447 G-CCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGA 12389 Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308 | ||||| || || || || || || ||| | ||| |||||| | || || || Sbjct 12388 AAATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGCTCATCAC 12329 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 ||||||| || ||||| || ||||| ||||||||| || || ||||| || || Sbjct 12328 TGATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATGGTCTCGATAGCAT 12269 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 || || | | || | | ||| | || || || || | ||| Sbjct 12268 CAAAAAGGAAATCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAG 12209 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||||||||| | ||||| || |||||||||||||||||| | |||||| | Sbjct 12208 TCTCAGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGTGCCTCAGCGA 12149 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||| ||||| | ||||| | || || |||||||| || || || ||||| || || | Sbjct 12148 CCTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTAACAATGCCATCAGAGGCGG 12089 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604 ||||||| || |||||| | | ||| || ||| ||| | || || ||| Sbjct 12088 CAAAGAACGCGAGGACACGGGAGATGAAGAATCGTTCGCTGTCATTCAG-GCGGTTGTTC 12030 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | |||||| | |||| |||||| |||||||||| || || || Sbjct 12029 CAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCTCGGCC 11970 Query 48665 TTTTTGTACATGCCCCATAT 48684 || |||||||| |||||| Sbjct 11969 TTCTTGTACATTTGCCATAT 11950 >seq2556 Length=115598 Score = 156 bits (172), Expect = 8e-33 Identities = 363/543 (67%), Gaps = 7/543 (1%) Strand=Plus/Plus Query 48146 TGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCC 48205 || || ||||| || |||||||||||| |||| || | || |||||||| | || Sbjct 98501 TGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAGGCCAGGCATCAGGCCG 98560 Query 48206 CTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCC 48265 | || || | ||||||||| | ||||| || ||||| || ||||| ||||| || || Sbjct 98561 CGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAAGATTCCCTCGACAGCA 98620 Query 48266 GCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC--TTGTCTGAGATCCAGGAAAGCG 48323 ||||| || | |||||| | |||| || ||| ||||| || ||||| || | Sbjct 98621 GCGAATGCCACCAATCTCTCTGCAAAAG-TGC-TTCGTTTGTCAGATATCCATTTGAGGG 98678 Query 48324 CCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGC 48383 ||||||| || || ||||||||| || || || ||||| || |||||| | || Sbjct 98679 CCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTCGAAGAGATATGCGC 98738 Query 48384 ACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACAT 48443 | | ||| || || ||| || ||| | ||| | ||||| || || | Sbjct 98739 GTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAAGTTTCAGAATGAACGT 98798 Query 48444 TCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGG 48503 | || || || |||||||| || ||| | |||||| | |||||||| | | Sbjct 98799 TTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCTGCTTGCACTTCGTTTG 98858 Query 48504 AGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGA 48563 | || | ||||| |||||| || || || || || || || || |||||||| ||||||| Sbjct 98859 AAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCGGCAAAGAATGCAAGGA 98918 Query 48564 CATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCCCTGTACGTCTT 48620 |||| | | |||||| ||||||| | | | | | | |||||| | | || | Sbjct 98919 CATGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGTTCCAGTCGACAAGATCAT 98978 Query 48621 TGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCC 48680 ||||| | |||||| |||||||| || || |||||| |||||||| || Sbjct 98979 GAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTGCTTTCTTGTACATCTGCC 99038 Query 48681 ATA 48683 ||| Sbjct 99039 ATA 99041 >seq2440 Length=22844 Score = 113 bits (124), Expect = 8e-20 Identities = 357/550 (65%), Gaps = 9/550 (2%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||| ||||| |||||| || || || || |||||||| | || || || | ||| Sbjct 14530 CAGGCGAAGTCGGTGTGCATTCCCTCATCACGACTGATGAGTTCATTTGAAAACGAAAGA 14471 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | |||||| | || | |||||| ||||| || || || | |||||| ||| Sbjct 14470 CCAGGCATAAGCCCCCTTTTCTTCAACCAGAAGATTGCGGCAAATGAACTAGAGAAAAAG 14411 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA- 48309 | ||||| || || || || ||| |||| | |||| || | | | ||| | || Sbjct 14410 AGTCCCTCAACAGCTGCAAATGCGACGAGC--CGTTCCGCAA-ACGTATGATTGGCCGAA 14354 Query 48310 --GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367 |||||| | ||||| ||| || || || | || || || || ||||| Sbjct 14353 TCGATCCATTTCAAAGCCCATGTTGCTTTATTGGCAATAGAAGGGATGGTTTCGATGGCG 14294 Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTAC 48427 || | | || | | | || | || |||||| || ||| | ||| Sbjct 14293 GAAAATAAGTGGTTTTGTTGTTCGGTGTTGGGAATATAGGTTTGGATAAGCAAAGAATAC 14234 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 ||||| || || | ||| || || ||| || || |||||||| | || ||| Sbjct 14233 ATCTCCGAATGAATATTTTCCATCATGATTTGAAAGCCGTAGAAACAACGAGCTTCAGGA 14174 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | | || || | | | ||| || | | || |||||||| || || || | ||| Sbjct 14173 AGTTTAACCTCGGAGCAAAATTGCTGTACTAAGTTTTCATTGACAATACCGTCCGCCGCA 14114 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC---ATTC 48604 |||||||| |||| ||| | || ||| || || || | | ||||||| |||| Sbjct 14113 GCAAAGAACGCAATAACACGACAAACGAAGTGACGTTCATCATTATTGAGAGCTGTATTC 14054 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| ||| ||||||| || |||||||||||||| ||||| || || || | || Sbjct 14053 CAGTCCTTGTTGTCTTTGGAGAGATCCACTTCTTCCACTGTCCAAAAAGATGCCACAGCC 13994 Query 48665 TTTTTGTACA 48674 |||||||||| Sbjct 13993 TTTTTGTACA 13984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931497366821120