Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq886 192 1e-43 seq2556 127 4e-24 >seq886 Length=61200 Score = 192 bits (212), Expect = 1e-43 Identities = 441/654 (67%), Gaps = 20/654 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||||||||| | ||| |||||| || |||||||| ||| | Sbjct 11950 ATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATTTA 12009 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGC-AGCATTTTCTCAAGTA 25595 | || ||| | | | |||| || | || ||| ||| | | || ||| | Sbjct 12010 TCAAAAGACCTTCATGACTGGAACAACCGCCTGAATGAC-AGCGAACGATTCTTCATCTC 12068 Query 25596 C-GTGT--TGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | |||| | || |||||||| ||||||||||| || || ||||||||||| ||| | Sbjct 12069 CCGTGTCCTCGCGTTCTTTGCCGCCTCTGATGGCATTGTTAACGAGAATCTTCTCGAACG 12128 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| | | ||||| ||| || ||||| || |||||||| |||||||| || Sbjct 12129 CTTCTCGAACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGAT 12188 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||||||| || | ||||| || || ||||| | |||| Sbjct 12189 GGAGAACATTCACTCTGAGACTTACTCT---CTTCTCATCGACACATACATCAAAGACCC 12245 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 | ||| | ||| || |||| ||| |||||| ||| || |||||||| | ||||| Sbjct 12246 TGTCGAACGTGATTTCCTTTTTGATGCTATCGAGACCATTCCTTGCATCAAGCGCAAGGC 12305 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTT--GGCGAGCGGCTGGT 25886 |||||| || ||||||| | | |||| || |||| |||||||| || || Sbjct 12306 CGAGTGGGCTCTGCGCTGGATCA---GTGATGAGCACTCGGTTTTCGGCGAGCGTCTCGT 12362 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 ||||||||||||||| || ||||| || ||| || || || ||| ||||||| ||| | Sbjct 12363 AGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGAT 12422 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 ||| || || ||||| || || || || |||||||||||||| | || || Sbjct 12423 GAAGAAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGA 12482 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 |||| | || | || || |||||||| || | || ||||| | | | ||| Sbjct 12483 GGGTATGCATACCGACTTCGCCTGCCTTCTTTTCA---GCCACCTCCGTCGTCGTCCTCA 12539 Query 26067 TCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 || || ||||| | |||| |||||||| || || | |||||| | ||||| Sbjct 12540 TCCTGACACCGTTGAACGTATTATCAAAGAAGCAGTCGCTATCGAGCAAGAGTT 12593 >seq2556 Length=115598 Score = 127 bits (140), Expect = 4e-24 Identities = 377/568 (66%), Gaps = 15/568 (3%) Strand=Plus/Minus Query 25478 TATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGG 25537 ||||| ||||||||||||| || || || ||||||| | ||||||||||| || Sbjct 99041 TATGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTCA 98982 Query 25538 CCAAGGACATGGACGGCTGGTACGCTCTATC---CAAAGACGAGCAGCATTTTCTCAAGT 25594 | | || | | || |||| ||| | || ||| ||||||| ||||| ||| Sbjct 98981 CTCATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACCC 98922 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 | || | ||||||||||| |||||||| ||||| |||||||| ||||||| ||| | | Sbjct 98921 ATGTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCGCT 98862 Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 | | | |||||||| | ||||| | || || || ||||| || || | Sbjct 98861 TTTCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGATGG 98802 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGA-CGTCGC 25772 |||| || || ||||| || | |||| | ||| || ||| | | || | | Sbjct 98801 AAAACGTTCATTCTGAAACTTACTCTCTGCTTATCGAT-ACATACGTCAAGGATCTTAAT 98743 Query 25773 CGA-GAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | | | | | || || || | || || || ||||| |||||||| | || || Sbjct 98742 CAACGCGCATAT---CTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCC 98686 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGA-GCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||| | || ||||| | | | || | | || |||| ||| | |||| || Sbjct 98685 GACTGGGCCCTCAAATGGAT-ATCTGACAAACGAAGCACTTTTGCAGAGAGATTGGTGGC 98627 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 || |||||||| ||||| |||||||| || ||||| || |||| |||||| | || Sbjct 98626 ATTCGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGGTTAAA 98567 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTT-TTCCAACGAGCTCATCAGCAGGGACGAGG 26008 | || || ||||| || || |||| ||| ||||||||||||||| | || || | Sbjct 98566 GAAGCGCGGCCTGATGCCTGGCCT-AACTTATTCAAACGAGCTCATCAGCCGAGATGAAG 98508 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCT 26036 || | || | ||||| || || || || Sbjct 98507 GTTTACATACCGATTTCGCGTGTCTCCT 98480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928809469065920