Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq777 98.7 1e-15 seq2440 82.4 9e-11 >seq777 Length=200876 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| ||||||||||||| | || || ||||| || || || || |||| Sbjct 114708 CCACAACATATGATCATGCGGGTCGCTGTTGGGATACACGGAGACGATATCGAGCATGTC 114767 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 ||| | |||||| || |||||| | | ||| |||| ||| || || || || ||||| Sbjct 114768 TTGCAAACATACAACCTCATGTCCGAGCGATAT-TTCACTCATGCCACTCCCACTCTCTT 114826 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| ||||| || || || |||||| ||||||||| | || || || || Sbjct 114827 CAATGCCGGTACCCCTTCGCCTCAAATGTCCTCATGCTTCCTTGTTTGCATGAAAGATGA 114886 Query 75391 CTCAATCAACGGTATCTA 75408 || ||| | |||||||| Sbjct 114887 TTCTATCGAAGGTATCTA 114904 >seq2440 Length=22844 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64981 AAGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCA 65040 || || |||||| |||||| |||| | || | ||||| || || || | |||||| Sbjct 14280 AACCACTTATTTTCCGCCATCGAAACCATCCCTTCTATTGCCAATAAAGCAACATGGGCT 14339 Query 65041 ATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGT 65100 |||||||| | || | || | || || || || || | || ||||| | Sbjct 14340 TTGAAATGGATCGATTCGGCCAATCATACGTTTGCGGAACGGCTCGTCGCATTTGCAGCT 14399 Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || ||||| |||| ||||| | ||||| ||| || | ||||||||||| |||| Sbjct 14400 GTTGAGGGACTCTTTTTCTCTAGTTCATTTGCCGCAATCTTCTGGTTGAAGAAAAGGGGG 14459 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 || ||||| || || | || ||||||||||| || || |||||||| Sbjct 14460 CTTATGCCTGGTCTTTCGTTTTCAAATGAACTCATCAGTCGTGATGAGGG 14509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596546907983840