Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 seq2933 93.3 4e-14 seq2578 89.7 5e-13 >seq1 Length=474241 Score = 122 bits (134), Expect = 8e-23 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || | ||||| || || || || || || || || | | Sbjct 254369 GATGCAGATCTTTGTGAAGACATTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCTTC 254428 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||| || ||||||||||| || |||||||| || Sbjct 254429 TGACACTATCGACAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCA 254488 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| |||||||||||||| || || ||| |||||||| | | | || || ||||| Sbjct 254489 ACAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAA 254548 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 |||||| || || || || || || ||||||| Sbjct 254549 CATTCAGAAAGAGTCTACCCTTCATCTTGGTG 254580 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || || || || | || || || | | Sbjct 254142 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTCT 254201 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| || || || || || || ||||| || ||| Sbjct 254202 GATACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAA 254261 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || ||||| || ||| | | | || |||||||| Sbjct 254262 CAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAAT 254321 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || ||||| |||||||| || || |||| Sbjct 254322 ATCCAAAAAGAATCGACTCTTCATCTTG 254349 >seq2933 Length=244213 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| || || || || | | Sbjct 207832 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACGATTACTCTGGAGGTTGAGTCGTCG 207891 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | ||||| |||||||| ||||| || || || || || || || Sbjct 207892 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 207951 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || || ||| |||||||| | | | || ||||| ||| Sbjct 207952 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 208011 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 || || ||||| ||||| || || ||||||| Sbjct 208012 ATCCAGAAGGAGTCGACTCTTCACCTTGGTG 208042 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| |||| || || || || ||||| || || | || || || | | Sbjct 207376 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 207435 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || |||||||||||| Sbjct 207436 GACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAA 207495 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||| || || || ||||| || ||| | | | | || || || ||| Sbjct 207496 CAACGACTAATCTTCGCTGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAAC 207555 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || || || ||| | || | || | || |||||| Sbjct 207556 ATTCAGAAGGAGTCAACCCTTCACCTTGTTCTTCGTCTACGTGGAGGC 207603 >seq2578 Length=112811 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || || || |||||||||||||||||||| ||||| || || || || ||| ||| Sbjct 100679 ATTCCCCCTGATCAACAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACT 100738 Query 24869 ATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || || ||||||||||| ||||||||||| || |||||||| Sbjct 100739 CTTTCCGACTATAACATTCAGAAGGAATCGACGCTCCACTTGGT 100782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449880487020040