Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2933 111 2e-19 seq2786 89.7 5e-13 seq1 87.8 2e-12 >seq2933 Length=244213 Score = 111 bits (122), Expect = 2e-19 Identities = 148/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| ||||||||||| | |||| ||| | ||||| | |||||||| Sbjct 207801 GGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCA-TCCTCCAACTGCTTGC 207743 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || ||||||| || || ||||| || || || ||||||||||| ||| || || Sbjct 207742 CAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCT 207683 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | | ||| || || | |||| || || || || || | Sbjct 207682 TGACATTGTCAATAGTGTCAGACGACTCGACCTCAAGAGTGATCGTCTTTCCCGTGAGTG 207623 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || ||||| ||||||||| || Sbjct 207622 TCTTGACGAAGATCTGCATGCCT 207600 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | |||| ||| | ||||| | ||||||||| Sbjct 208028 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCA-TCCTCCAACTGCTTGCC 207970 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || ||||||| ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 207969 AGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 207910 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | ||| || || | || | || ||||| || || || Sbjct 207909 TACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTGCCTGTGAGGGT 207850 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 207849 CTTGACGAAGATCTGCAT 207832 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || | ||| | | | || ||||||||||||| Sbjct 207573 GGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCA-TCTTCGAGCTGCTTGC 207515 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || || || || |||||||| ||||| ||||| || ||||| || Sbjct 207514 CAGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGTATCTTGGCCT 207455 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||| || || | |||| |||||||| || || | Sbjct 207454 TCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTGCCCGTGAGGG 207395 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || || |||||| || Sbjct 207394 TCTTAACAAAGATTTGCATGCCT 207372 >seq2786 Length=9315 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/197 (71%), Gaps = 5/197 (3%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| |||||||||||| | ||| ||| | ||||| | ||||||||| || Sbjct 1547 CTCCTTCTGAATATTGTAATCGGGC---GTGCGACCA-TCCTCCAACTGCTTGCCAGCAA 1602 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 ||||||| ||||||||||| || ||||| || |||||||| ||| || ||| | | Sbjct 1603 AAATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATTTTCGCCTTTACAT 1662 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | ||| || || | || | | || || || || || || | Sbjct 1663 TGTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTTTCCTGTGAGGGTCTTGA 1722 Query 133648 CGAAAATCTGCATGGCT 133664 |||| ||||||||| || Sbjct 1723 CGAAGATCTGCATGCCT 1739 >seq1 Length=474241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||||||||| || || || || | ||| ||| | ||||| | || Sbjct 254573 ATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCA-TCCTCCAACT 254515 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || | ||||| ||||||||||| |||||||| ||||| |||| Sbjct 254514 GCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCT 254455 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||||| | || | ||||| | | ||| || || | |||| || || |||| Sbjct 254454 TTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCGG 254395 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || || |||||||| Sbjct 254394 TCAATGTCTTCACAAAGATCTGCAT 254370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483402411881320