Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq777 129 7e-25 seq1368 116 4e-21 seq886 87.8 2e-12 >seq777 Length=200876 Score = 129 bits (142), Expect = 7e-25 Identities = 417/638 (65%), Gaps = 21/638 (3%) Strand=Plus/Plus Query 104965 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATT 105024 ||| |||||||| | || || ||||| |||||||| || || ||||| | |||| Sbjct 115615 TAACCAAAAGAACCTCGGAGTCATCAAATCATCCAATCTTTGCACTGAAATTGTCGAATA 115674 Query 105025 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084 | ||||| || ||||| ||||| || || || | ||||| || | || | Sbjct 115675 CTCTTCTCCGGATGAAACTGCTGTCTGTAATCTTGCTTCCCTTGCTCTTCCAACCTACAT 115734 Query 105085 ------GGATCCAGA-GACAAAGACATTT---GATTATGAAAAACTCCACGAAGTTACGA 105134 |||| || | |||| |||| |||| | |||||||| || ||||||| Sbjct 115735 AGTGAAGGATGCATCTGGCAAAC-CATTCTACGATTTCCAGAAACTCCATGATGTTACGA 115793 Query 105135 AAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGA 105191 |||| ||| | ||||| || | || |||||| | || | |||||| | |||| Sbjct 115794 AAACGGTCGCTTTCAACCTCAATCGCGTCATTGATCGCAACTACTACCCCATCCCTGAG- 115852 Query 105192 CTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGG 105251 || ||| |||||| ||| | ||||||| ||||| |||||||||| |||||||| | Sbjct 115853 --GCCCGTCGATCTAACATGCGTAACCGTCCCATTGGAATCGGTGTTCAAGGTCTCGCTG 115910 Query 105252 ATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCG 105310 | | ||||| | ||| | | | ||||| || |||||| |||||| |||| || Sbjct 115911 ACGCCTTCATGGCATTGAAGATGC-CTTTTGACTCGCCCGAAGCCAAGGAACTCAACACG 115969 Query 105311 CGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTT 105370 || || ||||| || || || | |||| ||||||||||| || |||| || Sbjct 115970 AAGATTTTCGAGACAATTTACCATGGCGCTTGTGAGGCGAGTTGCGAAATGGCGAAGACG 116029 Query 105371 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 105430 ||||||||||| || || | |||| ||| ||| |||||| | || || ||| Sbjct 116030 GATGGTCCATACGAGACGTGGATGGGTAGTCCTGCTCAGCAAGGGCAATTGCAGTTCGAT 116089 Query 105431 ATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAA 105489 | |||| || | ||| | | || || |||||| | | | ||||| |||| Sbjct 116090 CTATGGG-GTGTTACACCTACCGATCTCTGGGACTGGAATACGTTGAAGGAGAGCATTTC 116148 Query 105490 GGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACA 105549 || | || | | ||| || || | || |||||||| || ||||| || || Sbjct 116149 TAAGTATGGAATGAGGAACTCGCTGCTTACTGCACCAATGCCTACTGCCTCTACAAGTCA 116208 Query 105550 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 || | || || ||||||||||| || ||||||| Sbjct 116209 GATGCTCGGCTTCAACGAATGCTTTGAGCCTTACACGA 116246 Score = 89.7 bits (98), Expect = 6e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||| ||||||| || || | || || || || || || || || |||| Sbjct 114708 CCACAACATATGATCATGCGGGTCGCTGTTGGGATACACGGAGACGATATCGAGCATGTC 114767 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 104340 ||| | |||||| || |||||| | | ||| |||| ||| || || || || ||||| Sbjct 114768 TTGCAAACATACAACCTCATGTCCGAGCGATAT-TTCACTCATGCCACTCCCACTCTCTT 114826 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| ||||| || || ||||||||| ||||||||| | || || || || Sbjct 114827 CAATGCCGGTACCCCTTCGCCTCAAATGTCCTCATGCTTCCTTGTTTGCATGAAAGATGA 114886 Query 104401 CTCAATCAACGGTATCTA 104418 || ||| | |||||||| Sbjct 114887 TTCTATCGAAGGTATCTA 114904 >seq1368 Length=51257 Score = 116 bits (128), Expect = 4e-21 Identities = 225/327 (69%), Gaps = 14/327 (4%) Strand=Plus/Plus Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 |||||||| || |||||||| || ||||| ||||| || | || |||||| | || Sbjct 42911 AAACTCCATGATGTTACGAAGACGGTCACTTTCAACCTCAATCGCGTCATTGATCGCAAC 42970 Query 105176 TTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 105232 | |||||| || ||| || ||| |||||| ||| | ||||||| ||||| || Sbjct 42971 TACTACCCCATTCCTGAG---GCCCGTCGATCTAACATGCGTAACCGTCCCATTGGCATC 43027 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT-GATTCCGACG 105290 |||||||| |||||||| |||| ||||| | ||| | | || ||| || || | Sbjct 43028 GGTGTTCAAGGTCTCGCTGATGCCTTCATGGCGTTGAAG--ATGCCTTTCGACTCGCCCA 43085 Query 105291 AAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGA 105350 |||| |||||| |||| || || || ||||| || || || ||| |||||||| Sbjct 43086 AAGCCAAGGAACTCAACACGAAGATTTTCGAGACAATTTACCA----GCTTGTGAGGCGA 43141 Query 105351 GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 105410 ||| || |||| || ||||||||||| || || | |||| ||| ||| | Sbjct 43142 GTTGCGAAATGGCGAAGACGGATGGTCCATACGAGACGTGGATGGGTAGTCCTGCTCAGC 43201 Query 105411 AAGGGGTGCTTCAATTTGATATGTGGG 105437 ||||| | || |||||| | |||| Sbjct 43202 AAGGGCAATTGCAGTTTGATCTATGGG 43228 >seq886 Length=61200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| ||| | || ||||| |||||| || || ||||||||||| |||||| ||| | Sbjct 12352 GAGCGTCTCGTAGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTC-GCGTC 12410 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC-TTCTCCAACGAGCTTA 94921 || | |||| | |||||||| || | ||||| || || || ||||| |||||||| | Sbjct 12411 CATCTTTTGGATGAAGAAGCGTGGATTAATGCCTGG-CTTGGCGTTCTCAAACGAGCTCA 12469 Query 94922 TCTCTCGTGACGAGGG 94937 || |||||| ||||| Sbjct 12470 TCAGTCGTGATGAGGG 12485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583238614217320