Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 197 4e-45 seq1103 183 9e-41 seq2933 96.9 1e-14 seq1017 91.5 4e-13 seq2645 89.7 2e-12 seq1520 84.2 7e-11 >seq1 Length=474241 Score = 197 bits (218), Expect = 4e-45 Identities = 183/232 (79%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||||||||||||||| || |||||||| ||||||||||| Sbjct 254372 CATCCCACCACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATC 254313 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| || || |||||||||||||| |||||||| || ||||| Sbjct 254312 CGAAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGG 254253 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || || || ||||| ||||| | |||||| | || Sbjct 254252 AGGGATACCCTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTC 254193 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || | ||||||||||| | || || ||||| ||||||||| Sbjct 254192 CACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCATT 254141 Score = 172 bits (190), Expect = 2e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||||||||| ||||||||||| ||||| ||||| ||||| | || || ||||| || | Sbjct 254577 CAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCA 254518 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 || |||||||||||||| | ||| || || || |||||||| |||||||| ||||||| Sbjct 254517 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAA 254458 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| || || | ||||| | || || ||||| || | ||||||| Sbjct 254457 TCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTC 254398 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| | ||| || ||||| |||||||| Sbjct 254397 CGGTCAATGTCTTCACAAAGATCTGCAT 254370 Score = 105 bits (116), Expect = 2e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||||||||| |||||||| || || ||||| || || || Sbjct 254144 CATTCCACCACGAAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTGTAGTC 254085 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || ||||| ||||| |||||||| | || || |||||||| Sbjct 254084 AGAAAGAGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATCAATCGCTGTTGATCAGG 254025 Query 140627 AGGAAT 140632 |||||| Sbjct 254024 AGGAAT 254019 >seq1103 Length=350735 Score = 183 bits (202), Expect = 9e-41 Identities = 473/707 (67%), Gaps = 18/707 (3%) Strand=Plus/Minus Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACC 350026 ||||| || | || || || |||||||| |||||| | || || ||| | | || ||| Sbjct 87372 CGTCGTCTCCGTACCGCTTGCGAACGTGCCAAGCGTACTTTGTCTTCTGCCGCTCAGACC 87313 Query 350027 TCTATTGAAATTGATTCTCTTGC-TGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085 || || ||||| ||||| |||| ||| || | || |||| | || |||||||||| Sbjct 87312 TCGATCGAAATCGATTC-CTTGTATGAGGGTATTGACTTCTACACTTCCCTTACACGTGC 87254 Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAG 350144 || || || ||| | || || ||||| | |||| | | |||||||| || || | Sbjct 87253 CCGTTTCGAGGAACTCTGCCAAGACCTTTTCCGTAGCA-CTCTCGATCCTGTCGAGAAGG 87195 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATCAGATTG-ATGAAGTAGTTTTAGTTGGTGGT 350203 | | ||| | || || | || || || | ||| | || | || |||||| Sbjct 87194 TCCTTCGCGATTCCAAGAT-TGATAAGGCCAATGTGCACGAAATTGTCCTTGTCGGTGGT 87136 Query 350204 TCTACACGTATTCCAAAAGT--TCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC 350261 || || |||||||| | |||| | | | || || || || |||||||| || | Sbjct 87135 TCAACTCGTATTCCTCGTATCGTCAA--GCTCGTCTCCGACTTCTTCAATGGCAAGGAGC 87078 Query 350262 CTT-CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCT 350320 | | ||| || |||| || ||||| |||||||| || ||||||||||| || || | Sbjct 87077 CCAACAAGAGCA-TTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAAGCTGCG 87019 Query 350321 ATTTTATCTGGAAATAAGAGTTCT---AAAATTGATGATCTATTACTACTAGATGTAACT 350377 |||||||| || | | | |||| || | | | |||||| | || || || || || Sbjct 87018 ATTTTATCCGG---TGACACTTCTGAGAAGACTCAGGATCTACTTCTCCTCGACGTCTCT 86962 Query 350378 CCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAAT 350437 || || || || || | |||||| |||||| || ||||||| || || | || Sbjct 86961 CCCCTCTCTCTCGGTATTGAAACTGCTGGTGGTGTGATGACTGCACTCATCAAGCGTAAC 86902 Query 350438 AGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCG 350497 | ||||| || || || ||||| |||| || || || | || ||||| || || | Sbjct 86901 ACCACTGTCCCGACTAAGAAGTCTGAAACCTTCTCAACTTACGCCGATAACCAACCTGGT 86842 Query 350498 GTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGA 350557 || || ||||| || || |||||||||||||||||||| || || || ||||| Sbjct 86841 GTGCTCATCCAAGTCTTCGAGGGTGAACGTGCTCGCACTAAGGACAACAACCTCCTTGGG 86782 Query 350558 GAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCT 350617 |||| || || || ||||| || | || || ||||| || || ||| | Sbjct 86781 AAATTCGAGCTTTCTGGTATCCCACCTGCTCCCCGTGGTGTACCTCAAATCGAGGTCACC 86722 Query 350618 TTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 ||||| || ||| | || ||||| || |||||| | || | ||| || Sbjct 86721 TTCGACATCGATGCCAACGGTATCTTGAATGTTTCTGCCGCTGATAA 86675 Score = 159 bits (176), Expect = 1e-33 Identities = 279/402 (69%), Gaps = 3/402 (1%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 ||| |||||||| || || ||||| | | |||||||| |||| ||| ||||||| | Sbjct 87868 ACCTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACTGCCGAAGCATTCCT 87809 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || || | || | | || | || || || || || || ||||| | || || Sbjct 87808 CGGCACCACTATCACCAACTCAGTCGTGACCGTTCCCGCGTACTTCAATGACTCTCAACG 87749 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | ||||| || || || || | ||| | || | ||||| || | || ||||| || Sbjct 87748 TCAGGCAACCAAGGACGCCGGAACCATATCCGGAATGAATGTCCTCCGTATCATTAACGA 87689 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTA 349769 ||| ||||| || || ||||| ||||| ||||| |||| | ||| | || ||| Sbjct 87688 ACCAACTGCCGCGGCGATTGCTTATGGCCTTGACAAAAAG-GTGTCTGGCGAGCGTAATG 87630 Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 | | ||||| ||| | || || || ||||| ||||| || ||| | || | ||||| | Sbjct 87629 TCTTGATTTTCGATCTGGGAGGAGGAACTTTCGATGTTTCCCTATTGACGATCGAAGAAG 87570 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | ||||| ||||| ||||| ||||||||||| || |||||||| || || || ||||| | Sbjct 87569 GTATTTTCGAAGTCAAAGCCACTGCTGGTGACACCCATCTTGGCGGTGAGGACTTTGACA 87510 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG 349931 | | | ||| || ||| || ||||||| ||||| |||| Sbjct 87509 ACAGGTTGGTTAACCACTTTATTCAAGAATTCAAGCG-CAAG 87469 Score = 104 bits (114), Expect = 7e-17 Identities = 255/382 (67%), Gaps = 6/382 (2%) Strand=Plus/Plus Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 |||||| ||||| || || || | |||||| ||||||||||| ||||| || || Sbjct 201658 TGTACCTGCCTACTTCAACGACTCTCAGCGTCTGGCAACAAAAGACGCTGGTGCTATCGC 201717 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || | ||||||| | || || ||||| || |||||||| || ||||| || || || Sbjct 201718 TGGCCTCGATGTTCTCCGTATCATCAATGAGCCAACTGCTGCCGCTATTGCTTACGGTCT 201777 Query 349741 TGA--TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || ||| | ||| ||||| || | || ||||| ||||| || ||||| ||| Sbjct 201778 CGACCGTCAATCAAAAACC--GAAAAGAACGTCCTCATTTTCGATTTGGGAGGTGGAACT 201835 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || || | | | | || | || | || || || ||||||||| Sbjct 201836 TTCGATGTTTCCCTTTTGAATATCAGCGGCGGTGTCTTCGCTGTCAAGGCGACTGCTGGT 201895 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || ||| | ||||| || || ||||| || ||| | || || || || Sbjct 201896 GACACTCATTTGGGTGGTGAGGACTTTGACAACACCCTCTTGGAACACTTCAAGAACGAG 201955 Query 349919 TTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAG 349977 ||||| || |||| | || | || ||| ||| || | | ||| | | || ||||| Sbjct 201956 TTTAAACG-CAAGTCAAAGCTCGACATTTCCGATGATGCCCGTGCACTCAGACGTCTAAG 202014 Query 349978 AACTGCGTGTGAACGTGCTAAG 349999 || ||| ||||| ||||| ||| Sbjct 202015 AAGTGCTTGTGAGCGTGCCAAG 202036 >seq2933 Length=244213 Score = 96.9 bits (106), Expect = 1e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || || || || ||||||||||| || || ||||| Sbjct 207092 CATACCGCCACGAAGACGAAGGACTAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATC 207033 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| || || |||||||| |||||||| || || |||||||| || || || Sbjct 207032 CGAAAGAGTTCGTCCGTCCTCAAGTTGCTTTCCAGCGAAAATCAGACGTTGTTGGTCTGG 206973 Query 140627 AGGAAT 140632 |||||| Sbjct 206972 AGGAAT 206967 >seq1017 Length=59083 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | ||||| || || ||||| ||||| || |||||| Sbjct 44502 ACCACCACGAAGACGCAGCACTAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCACT 44561 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| ||||||||||||||||| || || || || || |||||||| || Sbjct 44562 CAGAGTACGTCCATCCTCAAGTTGTTTTCCAGCGAAAATGAGTCGCTGTTGATCAGGGGG 44621 Query 140630 AATTC 140634 ||||| Sbjct 44622 AATTC 44626 >seq2645 Length=110448 Score = 89.7 bits (98), Expect = 2e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 350195 GTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGC 350254 |||||||||||||| |||||||| ||||| |||||| | || || | ||| |||| Sbjct 17622 GTTGGTGGTTCTACGCGTATTCCCAAAGTCCAACAGCTCCTCAAAGAATATTTCGGTGGC 17681 Query 350255 AAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAG 350314 || || ||||| | || ||||| |||||||| ||||| || ||||| || |||||| Sbjct 17682 AAGGAGCCTTCAAAGGGTATCAATCCTGATGAAGCCGTTGCTTACGGTGCCGCAGTTCAG 17741 Query 350315 GCATCTATTTTATCTGG 350331 | | ||| | ||||| Sbjct 17742 GGAGGTATCCTCTCTGG 17758 >seq1520 Length=48961 Score = 84.2 bits (92), Expect = 7e-11 Identities = 171/249 (69%), Gaps = 14/249 (6%) Strand=Plus/Plus Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCT--TGATATTAATTCATTTGAAAATGTTAATC 223760 ||||| || || || | | | ||||| | ||||| | ||| |||||||| || || | Sbjct 6193 GCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATA--AGTTCGTTTGAAAAGGTCAACC 6250 Query 223761 CAGGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGC-AAAAAGCTCCTGaaaaaaaT 223819 |||||| ||| || | ||||| |||||||||| ||| | |||| ||| || ||||| Sbjct 6251 CAGGCAATAATCCACGTTTTTTGATCCAAAATA-TGCACGCGAAAGATCCGGAGAAAAAA 6309 Query 223820 ATACCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAA----AATTTGAATCTTTGTC 223875 || ||||| | | || || || | |||| |||| || |||| | ||| Sbjct 6310 ATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTGA----TCGTC 6365 Query 223876 TCCTATCCATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGC 223935 | | |||||| ||| |||||| | ||||||| ||||| |||| || |||| | || Sbjct 6366 TTCGATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGA 6425 Query 223936 ATTAAACAA 223944 | | ||||| Sbjct 6426 ACTGAACAA 6434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515195322598529