Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2556 165 7e-36 seq2440 147 2e-30 seq1520 141 8e-29 >seq2556 Length=115598 Score = 165 bits (182), Expect = 7e-36 Identities = 372/553 (67%), Gaps = 11/553 (2%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 |||||| ||||| ||| |||||||| |||| ||| || || ||||| ||| | |||| Sbjct 98485 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 98544 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || ||||| | || | ||| || | ||| || || | || || ||||||||||| || Sbjct 98545 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 98604 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726 || || || || || || || || || |||| | || | ||| |||||| Sbjct 98605 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTGTCAGA 98664 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 |||||||| | ||||||| ||||| ||| | |||||| ||||| | ||| |||| Sbjct 98665 TATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTC 98724 Query 4787 AAATA-ATTTAC---TTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 || | || | | || || | || |||| | || || || || || || | Sbjct 98725 GAAGAGATATGCGCGTTGATTAAGAT---CCTTG-ACGTATGTATCGATAAGCAGAGAGT 98780 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | |||||||||| | ||||| || || || || || |||||| | | || || | Sbjct 98781 AAGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAG 98840 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | |||| |||||||| |||| | || | | |||||||| || ||||||||| || Sbjct 98841 CTGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGG 98900 Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCA-GGCTTAA--GTTTTT 5019 | ||||| || || | ||||| | || || | | |||||| | |||| | | | Sbjct 98901 CGGCAAAGAATGCAAGGACATGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGT 98960 Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079 |||||| | | ||| | ||| | |||| ||||| ||||| ||||| ||||| | Sbjct 98961 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 99020 Query 5080 CTTTTTTGTACAT 5092 |||| |||||||| Sbjct 99021 CTTTCTTGTACAT 99033 >seq2440 Length=22844 Score = 147 bits (162), Expect = 2e-30 Identities = 384/581 (66%), Gaps = 11/581 (2%) Strand=Plus/Minus Query 4518 GGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCT 4577 ||||||| || || ||||||| |||||| || || || |||| || || || Sbjct 14560 GGTTTATGTAATAGCAGACCAAACAGTAAACAGGCGAAGTCGGTGTGCATTCCCTCATCA 14501 Query 4578 CTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAA 4637 | || || ||||| || ||||||| | || ||||| | || || || || | ||| Sbjct 14500 CGACTGATGAGTTCATTTGAAAACGAAAGACCAGGCATAAGCCCCCTTTTCTTCAACCAG 14441 Query 4638 AATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAAT 4697 || || ||||||||||| | ||| || || | || || || || ||||| || || | Sbjct 14440 AAGATTGCGGCAAATGAACTAGAGAAAAAGAGTCCCTCAACAGCTGCAAATGCGACGAGC 14381 Query 4698 CGGGACCCGAACGAGCTGGCTTTGTCT--TTAATCCATTTTAATGCCCAGTTAGCTTTTT 4755 || | | |||| | || | | | |||||||| || ||||| | ||||| | Sbjct 14380 CGTTCCGCAAACGTAT--GATTGGCCGAATCGATCCATTTCAAAGCCCATGTTGCTTTAT 14323 Query 4756 TCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTT 4815 | || | || || || | || ||| |||||| | ||| || | ||| || Sbjct 14322 TGGCAATAGAAGGGATGGTTTCGATGGCGGAAAATAAGTGGTTTTGTTGT--TCGGTGTT 14265 Query 4816 G--AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAAT 4873 | |||||| || | || || | |||||| || ||||| |||||||| || || Sbjct 14264 GGGAATATAGGTTTGGATAAGCAAAGAATACATCTCCGAATGAATATTTTCCATCATGAT 14205 Query 4874 CTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTAC 4933 ||||| ||||| || || | |||||| | | || ||| ||| |||||| | ||| Sbjct 14204 TTGAAAGCCGTAGAAACAACGAGCTTCAGGAAGTTTAACCTCGGAGCAAAATTGCTGTAC 14145 Query 4934 TAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAA 4993 ||||||||| || || |||||||| || ||||| ||||| | |||| || | | || Sbjct 14144 TAAGTTTTCATTGACAATACCGTCCGCCGCAGCAAAGAACGCAATAACACGACAAACGAA 14085 Query 4994 GTACTGTTCGTCAGGCTTAAG---TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 || |||| ||| || || | | ||||||| ||||| | | ||| || Sbjct 14084 GTGACGTTCATCATTATTGAGAGCTGTATTCCAGTCCTTGTTGTCTTTGGAGAGATCCAC 14025 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091 |||||| || |||||||| || || | || |||||||||| Sbjct 14024 TTCTTCCACTGTCCAAAAAGATGCCACAGCCTTTTTGTACA 13984 >seq1520 Length=48961 Score = 141 bits (156), Expect = 8e-29 Identities = 355/534 (66%), Gaps = 9/534 (2%) Strand=Plus/Plus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| ||||| || | ||| || |||||||| ||||| || || || |||| ||| || Sbjct 6205 TGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAACCCAGGCAATAATCCA 6264 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||||| | ||||||||| || || || || || || || || ||||| | ||| Sbjct 6265 CGTTTTTTGATCCAAAATATGCACGCGAAAGATCCGGAGAAAAAAATTCCTTCGATGGCT 6324 Query 4683 GCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGC 4741 | || || || | ||| | | |||| | || | | ||||| |||||| ||| ||| Sbjct 6325 GAGAATGCAACGAGTCGTTCCGCAAACGTAACTTGATC-GTCTTCGATCCATCTTAGTGC 6383 Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTT 4801 ||| ||||||| |||| ||| ||||| || | |||| | || || | Sbjct 6384 CCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACTGAACAAGAATGATCG 6443 Query 4802 TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATT 4861 ||| || || ||||| ||||| || | || || | || |||| ||||| || || Sbjct 6444 TTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGAGTAAGTTTCTGAATGGATGTT 6503 Query 4862 TTCTATAGCAAT--CTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTA 4919 ||| || || | ||| ||||| || ||| ||| ||| || | || |||| ||| || Sbjct 6504 TTCCAT--CATTGACTGGAATCCATAGAAGGATCGAGCCTCAGCGACCTGAATTTCACTA 6561 Query 4920 CAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAA 4979 | || | |||||||||||||| |||||||| || || ||||| || | Sbjct 6562 GAGAAGTGACGGATCAAGTTTTCGTTTACAATACCGTCGGACGCAGCGAAAAATGCTAGC 6621 Query 4980 ACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGGGGCAAATCT 5036 ||| ||| | || | | |||| | || | | || ||||||| | ||||||| Sbjct 6622 ACACGAGCCGTGAAAAAGCGCTCGTTTGCGTTCATGCGGTTGTTCCAGTCGTGCAAATCG 6681 Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTAC 5090 || | | || | |||||| |||||| || || || || |||||||||||| Sbjct 6682 TTTGAAAGGTCTATTTCTTCGGTAGTCCAGAAGGAAGCCTCAGCTTTTTTGTAC 6735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427033762198319