Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1582 93.3 3e-14 >seq1582 Length=47868 Score = 93.3 bits (102), Expect = 3e-14 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 27492 GTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 |||| |||||||||| |||||||| ||||||||||| || ||||| || |||| || || Sbjct 5262 GTCCTTGTACTCTGCGCCGAAATGTCTCCATTGGAATCCATACACAGGACCCAAATCCCC 5203 Query 27552 CTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCA 27611 || ||| ||| | | || | ||||| ||| || | |||||||| | ||||| Sbjct 5202 TTCACGCCTATGCCCCAGTCCACGGCCTTCCAAGAAGGCTTTCGAACCGTTTCCATCCCA 5143 Query 27612 GATCTTTACCCCCTTCT-CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACA 27670 ||||| || ||||||| || || || |||| | || | || ||||||||| | Sbjct 5142 TATCTTGACGCCCTTCTGCGACAAGATC-GTGGAATCGGTACAGCCATGGACGAACCAGA 5084 Query 27671 GCAGCTCCTC 27680 |||| || || Sbjct 5083 GCAGTTCTTC 5074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369493496248133