Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13]
3,043 sequences; 40,928,581 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2556 150 3e-31
seq1520 141 1e-28
seq1379 91.5 2e-13
seq777 89.7 7e-13
>seq2556
Length=115598
Score = 150 bits (166), Expect = 3e-31
Identities = 375/561 (67%), Gaps = 14/561 (2%)
Strand=Plus/Plus
Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688
||| || ||||| ||| | |||||||||| || || | ||||| ||| | || ||
Sbjct 98485 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 98544
Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748
|||||||| || || ||||| || | ||| || || | ||||| || |||||||| ||
Sbjct 98545 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 98604
Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805
|| || || ||||| |||||||| || | ||||||| | || || | || || |
Sbjct 98605 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTG-CTTCGTTTGTCAG 98663
Query 46806 A-ATCCACCTTTGAG--CCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862
| ||||| |||||| |||| || || || ||| | || || ||||||||||| ||
Sbjct 98664 ATATCCA--TTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 98721
Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922
| |||||| | || || | ||| || || |||||||| || | ||| ||
Sbjct 98722 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 98781
Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982
|||| ||||||| |||||| || || || || || ||||| | | || ||||
Sbjct 98782 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 98841
Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042
|| || || | |||| || || ||| ||| || ||||| || || ||| ||
Sbjct 98842 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 98901
Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCG-GTAGTCAGTTTAT 47098
||||| ||||| | ||||| | || |||| | |||| | || || | | |
Sbjct 98902 GGCAAAGAATGCAAGGACATGGGTGATGAAATGACGCTCGTCATTGTTTAATC-GCTCGT 98960
Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158
||||||| | ||| | | | || | ||||| | |||||||| || || ||||
Sbjct 98961 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 99020
Query 47159 CTTTTTTATACATATTCCATA 47179
|||| || ||||| | |||||
Sbjct 99021 CTTTCTTGTACATCTGCCATA 99041
>seq1520
Length=48961
Score = 141 bits (156), Expect = 1e-28
Identities = 368/553 (67%), Gaps = 20/553 (4%)
Strand=Plus/Plus
Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689
|||||||| || || | |||||||| | || || | |||||| ||||| || | |
Sbjct 6190 CATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAAC 6249
Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749
||||||| || |||||| ||||||| ||||||||| |||||||||||| || || ||
Sbjct 6250 CCAGGCAATAATCCACGTTTTTTGATCCAAAATATGCACGCGAAAGATCCGGAGAAAAAA 6309
Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTC----TCCGTAACTGGCATCATTATG 46805
|| ||||| | || | |||||| || |||| || ||||||| | ||| | |
Sbjct 6310 ATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTG-ATCGTCTTC 6368
Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865
||||| ||| | ||||| | || |||| || | ||||| || ||||| |||| | |
Sbjct 6369 GATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACT 6428
Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATAC 46923
|| | || | ||| ||||| | ||| || | || | ||||| ||
Sbjct 6429 GAACAAGAATGATCGTTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGA--GTAA 6486
Query 46924 ATTTCTGAATGAATGTTTTCAATAGCCAT---CTGAAATCCGTAAAAACATCTTGCTTCA 46980
|||||||||| |||||||| || ||| ||| ||||| || || ||| || |||
Sbjct 6487 GTTTCTGAATGGATGTTTTCCAT---CATTGACTGGAATCCATAGAAGGATCGAGCCTCA 6543
Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGA-CAAATTCTCATTCACTATTCCATCACT 47039
| | ||| | || || | || | | || ||| || || || || || || ||
Sbjct 6544 GCGACCTGAATTTCACTAGAGAAGTG-ACGGATCAAGTTTTCGTTTACAATACCGTCGGA 6602
Query 47040 AGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCAT---CGGTAGTCAGTTT 47096
||||| |||||||| | ||| | | ||| | || | || | | | ||
Sbjct 6603 CGCAGCGAAAAATGCTAGCACACGAGCCGTGAAAAAGCGCTCGTTTGCGTTCATGCGGTT 6662
Query 47097 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTC 47156
|||||||| | | ||| ||||| | |||| |||||| | |||||||| || |||||
Sbjct 6663 GTTCCAGTCGTGCAAATCGTTTGAAAGGTCTATTTCTTCGGTAGTCCAGAAGGAAGCCTC 6722
Query 47157 TGCTTTTTTATAC 47169
|||||||| |||
Sbjct 6723 AGCTTTTTTGTAC 6735
Score = 87.8 bits (96), Expect = 3e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 46344 GTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCAT 46403
|||||| ||| || || || |||||||| ||||| ||||||| ||||| | |||||
Sbjct 5851 GTATTCGGATACTCGCTTTTCAAAAAAATTTGTTTTTCCTTCCAGAGATATCATGTCCAT 5910
Query 46404 AAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCT 46463
|||||||| || || | ||||| || | ||| || || | | | || |||||
Sbjct 5911 GAAATCAAAAGGGTTCCTGACATTGTATAATTTGTTGTTCCCAAGTGCATTAAGCAGTCC 5970
Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTAT 46514
||| |||| ||| || || || | ||||| ||| |||||||||||||
Sbjct 5971 ATCCGCAATGAACTCGATGTATATGCACATCAGCTCATAATTCATTCCTAT 6021
>seq1379
Length=51093
Score = 91.5 bits (100), Expect = 2e-13
Identities = 168/240 (70%), Gaps = 5/240 (2%)
Strand=Plus/Minus
Query 76606 CATA-AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCAT 76664
|||| || | ||| || ||||||||||| ||||| || || |||| ||||||| |
Sbjct 1917 CATACAACAAATCTGGAATCCATAGAGCGTAAAATAAGTCGCGTGTTCGCAGTTCTTCCT 1858
Query 76665 TTCC-TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723
| || || | | | ||| | | || | | | || || | |||||| ||||| |
Sbjct 1857 TCCCGTGGACTTTGCGCAAGCT-GATGATCGCGAAGATGTCTGCATGCCACGGTTCAACG 1799
Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783
|| || || | | | || || |||||||| ||||| ||||| | ||||| | || |
Sbjct 1798 TAGATGGCTAAAGCTCCGGGACGTTTATTGCCTCCTTGATCAACGTATCTTGACGTAGCA 1739
Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATA 76842
||||||||| | ||| |||| ||| |||||||| ||| || || ||||||| ||||||
Sbjct 1738 TTATAAACTTGAAGCATCGGAACAATACCGTTAGA-GTACCCGTTCGTTCCAGCAATATA 1680
Score = 89.7 bits (98), Expect = 7e-13
Identities = 172/249 (69%), Gaps = 6/249 (2%)
Strand=Plus/Minus
Query 75883 CCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT--CCGTTG 75940
||||||||| |||| | || |||| |||| ||||| |||||| ||| ||| |
Sbjct 2756 CCAATCCCAGCGATCAGTAGGGCAAACACCCCACAGATCAAATTGTA--ATTGACCGCGG 2699
Query 75941 CTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA-GCTAGTTCGCAACT 75999
|||| || ||||| | | ||||| | ||| | ||||| || | |||||||||
Sbjct 2698 TGAGCAGGAGAGCCATTCCAAGACTCGTATGGACCG-CATTTTCTCGCGATTTCGCAACT 2640
Query 76000 CGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTC 76059
|||||| | ||||| | |||||| |||||||| |||| | || || | || |||||
Sbjct 2639 CGCCTCACAGGCACCATGATAAATCGTTTCGAATATCTGGATGTTTAGCTGTTTTGCTTC 2580
Query 76060 AAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAAT 76119
|| ||| || || | ||| | ||||| |||| || || || || || |||||
Sbjct 2579 AACCGAATCGAATGGCATCTTTAACACCATAAAGACATCGGCAAGACCTTGCACACCAAT 2520
Query 76120 ACCAATAGG 76128
|||||| ||
Sbjct 2519 ACCAATGGG 2511
>seq777
Length=200876
Score = 89.7 bits (98), Expect = 7e-13
Identities = 209/313 (67%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936
||||| || || || ||| ||| | ||||||| ||||| || || ||||| ||
Sbjct 114955 CCTATGCCACCGGCTGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCGTAGATACCT 114896
Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996
|| ||| |||||| ||||| || ||| || || ||||||||| | | ||
Sbjct 114895 TCGATAGAATCATCTTTCATGCAAACAAGGAAGCATGAGGACATTTGAGGCGAAGGGGTA 114836
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056
|| ||||| || | || |||| ||||||||||| || || || | || ||||||
Sbjct 114835 CCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAAATATCGCTCGGACATGAGGTTGTAT 114776
Query 77057 GTTT-CAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACAT 77115
|||| ||| | ||| || ||||| | || || || |||||||| ||||| | |||
Sbjct 114775 GTTTGCAAGACATGC-TCGATATCGTCTCCGTGTATCCCAACAGCGACCCGCATGATCAT 114717
Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175
||| || || || || || | | || | | | |||||| |||||| ||
Sbjct 114716 ATGTTGTGGCCGCTCAGCAATACGACCGTTAAGGCGAATGAGGTATGACCGTTCCAAGGT 114657
Query 77176 TTTAAAACCAAAA 77188
|||||| ||||||
Sbjct 114656 TTTAAATCCAAAA 114644
Score = 87.8 bits (96), Expect = 3e-12
Identities = 162/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
|||||||| || |||||||||||| |||| ||| |||| | ||| || || ||
Sbjct 115281 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 115222
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
|||||| | | ||| | | | | | ||||||| |||||| ||||| ||||| ||
Sbjct 115221 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 115162
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | | | || || || || ||||| || || || | ||||| ||||| ||| ||
Sbjct 115161 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 115102
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATAA 76843
| | | |||||| | ||| || || || ||| ||||| || || | ||| |||
Sbjct 115101 GCCCGAAGCATTGGCACAATACCATTCGA-GTACCCATTCGTGCCGGCAATGTAA 115048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712907281757760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |