Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2556 150 3e-31 seq1520 141 1e-28 seq1379 91.5 2e-13 seq777 89.7 7e-13 >seq2556 Length=115598 Score = 150 bits (166), Expect = 3e-31 Identities = 375/561 (67%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| || ||||| ||| | |||||||||| || || | ||||| ||| | || || Sbjct 98485 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 98544 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| || || ||||| || | ||| || || | ||||| || |||||||| || Sbjct 98545 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 98604 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805 || || || ||||| |||||||| || | ||||||| | || || | || || | Sbjct 98605 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTG-CTTCGTTTGTCAG 98663 Query 46806 A-ATCCACCTTTGAG--CCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862 | ||||| |||||| |||| || || || ||| | || || ||||||||||| || Sbjct 98664 ATATCCA--TTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 98721 Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922 | |||||| | || || | ||| || || |||||||| || | ||| || Sbjct 98722 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 98781 Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982 |||| ||||||| |||||| || || || || || ||||| | | || |||| Sbjct 98782 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 98841 Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042 || || || | |||| || || ||| ||| || ||||| || || ||| || Sbjct 98842 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 98901 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCG-GTAGTCAGTTTAT 47098 ||||| ||||| | ||||| | || |||| | |||| | || || | | | Sbjct 98902 GGCAAAGAATGCAAGGACATGGGTGATGAAATGACGCTCGTCATTGTTTAATC-GCTCGT 98960 Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158 ||||||| | ||| | | | || | ||||| | |||||||| || || |||| Sbjct 98961 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 99020 Query 47159 CTTTTTTATACATATTCCATA 47179 |||| || ||||| | ||||| Sbjct 99021 CTTTCTTGTACATCTGCCATA 99041 >seq1520 Length=48961 Score = 141 bits (156), Expect = 1e-28 Identities = 368/553 (67%), Gaps = 20/553 (4%) Strand=Plus/Plus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 |||||||| || || | |||||||| | || || | |||||| ||||| || | | Sbjct 6190 CATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAAC 6249 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 ||||||| || |||||| ||||||| ||||||||| |||||||||||| || || || Sbjct 6250 CCAGGCAATAATCCACGTTTTTTGATCCAAAATATGCACGCGAAAGATCCGGAGAAAAAA 6309 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTC----TCCGTAACTGGCATCATTATG 46805 || ||||| | || | |||||| || |||| || ||||||| | ||| | | Sbjct 6310 ATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTG-ATCGTCTTC 6368 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| ||| | ||||| | || |||| || | ||||| || ||||| |||| | | Sbjct 6369 GATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACT 6428 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATAC 46923 || | || | ||| ||||| | ||| || | || | ||||| || Sbjct 6429 GAACAAGAATGATCGTTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGA--GTAA 6486 Query 46924 ATTTCTGAATGAATGTTTTCAATAGCCAT---CTGAAATCCGTAAAAACATCTTGCTTCA 46980 |||||||||| |||||||| || ||| ||| ||||| || || ||| || ||| Sbjct 6487 GTTTCTGAATGGATGTTTTCCAT---CATTGACTGGAATCCATAGAAGGATCGAGCCTCA 6543 Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGA-CAAATTCTCATTCACTATTCCATCACT 47039 | | ||| | || || | || | | || ||| || || || || || || || Sbjct 6544 GCGACCTGAATTTCACTAGAGAAGTG-ACGGATCAAGTTTTCGTTTACAATACCGTCGGA 6602 Query 47040 AGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCAT---CGGTAGTCAGTTT 47096 ||||| |||||||| | ||| | | ||| | || | || | | | || Sbjct 6603 CGCAGCGAAAAATGCTAGCACACGAGCCGTGAAAAAGCGCTCGTTTGCGTTCATGCGGTT 6662 Query 47097 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTC 47156 |||||||| | | ||| ||||| | |||| |||||| | |||||||| || ||||| Sbjct 6663 GTTCCAGTCGTGCAAATCGTTTGAAAGGTCTATTTCTTCGGTAGTCCAGAAGGAAGCCTC 6722 Query 47157 TGCTTTTTTATAC 47169 |||||||| ||| Sbjct 6723 AGCTTTTTTGTAC 6735 Score = 87.8 bits (96), Expect = 3e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 46344 GTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCAT 46403 |||||| ||| || || || |||||||| ||||| ||||||| ||||| | ||||| Sbjct 5851 GTATTCGGATACTCGCTTTTCAAAAAAATTTGTTTTTCCTTCCAGAGATATCATGTCCAT 5910 Query 46404 AAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCT 46463 |||||||| || || | ||||| || | ||| || || | | | || ||||| Sbjct 5911 GAAATCAAAAGGGTTCCTGACATTGTATAATTTGTTGTTCCCAAGTGCATTAAGCAGTCC 5970 Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTAT 46514 ||| |||| ||| || || || | ||||| ||| ||||||||||||| Sbjct 5971 ATCCGCAATGAACTCGATGTATATGCACATCAGCTCATAATTCATTCCTAT 6021 >seq1379 Length=51093 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/240 (70%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 76606 CATA-AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCAT 76664 |||| || | ||| || ||||||||||| ||||| || || |||| ||||||| | Sbjct 1917 CATACAACAAATCTGGAATCCATAGAGCGTAAAATAAGTCGCGTGTTCGCAGTTCTTCCT 1858 Query 76665 TTCC-TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 | || || | | | ||| | | || | | | || || | |||||| ||||| | Sbjct 1857 TCCCGTGGACTTTGCGCAAGCT-GATGATCGCGAAGATGTCTGCATGCCACGGTTCAACG 1799 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || || || | | | || || |||||||| ||||| ||||| | ||||| | || | Sbjct 1798 TAGATGGCTAAAGCTCCGGGACGTTTATTGCCTCCTTGATCAACGTATCTTGACGTAGCA 1739 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATA 76842 ||||||||| | ||| |||| ||| |||||||| ||| || || ||||||| |||||| Sbjct 1738 TTATAAACTTGAAGCATCGGAACAATACCGTTAGA-GTACCCGTTCGTTCCAGCAATATA 1680 Score = 89.7 bits (98), Expect = 7e-13 Identities = 172/249 (69%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 75883 CCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT--CCGTTG 75940 ||||||||| |||| | || |||| |||| ||||| |||||| ||| ||| | Sbjct 2756 CCAATCCCAGCGATCAGTAGGGCAAACACCCCACAGATCAAATTGTA--ATTGACCGCGG 2699 Query 75941 CTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA-GCTAGTTCGCAACT 75999 |||| || ||||| | | ||||| | ||| | ||||| || | ||||||||| Sbjct 2698 TGAGCAGGAGAGCCATTCCAAGACTCGTATGGACCG-CATTTTCTCGCGATTTCGCAACT 2640 Query 76000 CGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTC 76059 |||||| | ||||| | |||||| |||||||| |||| | || || | || ||||| Sbjct 2639 CGCCTCACAGGCACCATGATAAATCGTTTCGAATATCTGGATGTTTAGCTGTTTTGCTTC 2580 Query 76060 AAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAAT 76119 || ||| || || | ||| | ||||| |||| || || || || || ||||| Sbjct 2579 AACCGAATCGAATGGCATCTTTAACACCATAAAGACATCGGCAAGACCTTGCACACCAAT 2520 Query 76120 ACCAATAGG 76128 |||||| || Sbjct 2519 ACCAATGGG 2511 >seq777 Length=200876 Score = 89.7 bits (98), Expect = 7e-13 Identities = 209/313 (67%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 ||||| || || || ||| ||| | ||||||| ||||| || || ||||| || Sbjct 114955 CCTATGCCACCGGCTGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCGTAGATACCT 114896 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || ||| |||||| ||||| || ||| || || ||||||||| | | || Sbjct 114895 TCGATAGAATCATCTTTCATGCAAACAAGGAAGCATGAGGACATTTGAGGCGAAGGGGTA 114836 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || ||||| || | || |||| ||||||||||| || || || | || |||||| Sbjct 114835 CCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAAATATCGCTCGGACATGAGGTTGTAT 114776 Query 77057 GTTT-CAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACAT 77115 |||| ||| | ||| || ||||| | || || || |||||||| ||||| | ||| Sbjct 114775 GTTTGCAAGACATGC-TCGATATCGTCTCCGTGTATCCCAACAGCGACCCGCATGATCAT 114717 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175 ||| || || || || || | | || | | | |||||| |||||| || Sbjct 114716 ATGTTGTGGCCGCTCAGCAATACGACCGTTAAGGCGAATGAGGTATGACCGTTCCAAGGT 114657 Query 77176 TTTAAAACCAAAA 77188 |||||| |||||| Sbjct 114656 TTTAAATCCAAAA 114644 Score = 87.8 bits (96), Expect = 3e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 |||||||| || |||||||||||| |||| ||| |||| | ||| || || || Sbjct 115281 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 115222 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 |||||| | | ||| | | | | | ||||||| |||||| ||||| ||||| || Sbjct 115221 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 115162 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | | || || || || ||||| || || || | ||||| ||||| ||| || Sbjct 115161 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 115102 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATAA 76843 | | | |||||| | ||| || || || ||| ||||| || || | ||| ||| Sbjct 115101 GCCCGAAGCATTGGCACAATACCATTCGA-GTACCCATTCGTGCCGGCAATGTAA 115048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712907281757760