Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13]
3,043 sequences; 40,928,581 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq2440 132 5e-26
seq2556 102 8e-17
seq886 96.9 4e-15
seq1520 87.8 2e-12
>seq2440
Length=22844
Score = 132 bits (146), Expect = 5e-26
Identities = 383/580 (66%), Gaps = 17/580 (3%)
Strand=Plus/Minus
Query 23499 AAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGA 23558
||||| |||||| || || || || | || ||||| | ||| || | |||||| ||
Sbjct 14540 AAACAGTAAACAGGCGAAGTCGGTGTGCATTCCCTCATCACGACTGATGAGTTCATTTGA 14481
Query 23559 AAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCC 23618
||| | | || ||||| | || | ||| || | ||| || ||||| |||||||| |
Sbjct 14480 AAACGAAAGACCAGGCATAAGCCCCCTTTTCTTCAACCAGAAGATTGCGGCAAATGAACT 14421
Query 23619 GGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATT 23678
|| || || | ||||||||||| ||||| || || || ||| |||| || ||
Sbjct 14420 AGAGAAAAAGAGTCCCTCAACAGCTGCAAATGCGACGAGCCGTTCCGCAAACGT---ATG 14364
Query 23679 ATAATCAGAA---ATCCAtttttttGTCCAATTAGCCTTCAATTTT--ACACACTCAATT 23733
|| | ||| |||||||| | ||| | || || ||| | | | ||
Sbjct 14363 ATTGGCCGAATCGATCCATTTCAAAGCCCATGTTGCTTT--ATTGGCAATAGAAGGGATG 14306
Query 23734 GTTTCAATTGCTTTTAAGAGAAAAGTTTT-TTCTTCATTATCTGTTATATATGTATCAAT 23792
||||| || || || | | ||||| || ||| | | | ||||| || | ||
Sbjct 14305 GTTTCGATGGCGGAAAATA-AGTGGTTTTGTTGTTCGGTGTTGGGAATATAGGTTTGGAT 14247
Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852
|| ||| |||||| || |||||||||||||| || || ||||| || || |||||
Sbjct 14246 AAGCAAAGAATACATCTCCGAATGAATATTTTCCATCATGATTTGAAAGCCGTAGAAACA 14187
Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912
| |||||||| | || ||| || ||||| | |||| ||||| || |||||
Sbjct 14186 ACGAGCTTCAGGAAGTTTAACCTCGGAGCAAAATTGCTGTACTAAGTTTTCATTGACAAT 14127
Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTT 23970
||| || ||||||||||| |||| |||| | || || | ||||||| ||
Sbjct 14126 ACCGTCCGCCGCAGCAAAGAACGCAATAACACGACAAACGAAGTGACGTTCATCATTATT 14067
Query 23971 GATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|| | | | ||||| || || | ||||| || | ||| ||||| || |||||||||||
Sbjct 14066 GAGAGCTGTATTCCAGTCCTTGTTGTCTTTGGAGAGATCCACTTCTTCCACTGTCCAAAA 14007
Query 24030 ACTTGCCAAGGCACGCTTATACATTAGCCAAA--TATCAT 24067
| ||||| || || |||| | ||||| ||||||
Sbjct 14006 AGATGCCACAGCCTTTTTGTACAGTTCCCAAATCTATCAT 13967
>seq2556
Length=115598
Score = 102 bits (112), Expect = 8e-17
Identities = 296/452 (65%), Gaps = 4/452 (1%)
Strand=Plus/Plus
Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567
||| || ||||| ||||| |||||||| | || || | || || ||| | ||||
Sbjct 98485 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 98544
Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627
|| ||||| | || || || || | ||| || || | ||| || || || ||||| ||
Sbjct 98545 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 98604
Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACG-TGTACCAAA-TGTTGCATTATAATCA 23685
|| ||||| ||||| || || ||||| | | | | | ||| || | | || |||
Sbjct 98605 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTG--TCA 98662
Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745
|| |||||||| | ||| | || || || | ||| |||||||| |||||
Sbjct 98663 GATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCG 98722
Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805
| |||||| | | || | | ||| | | |||||||| || || | | ||
Sbjct 98723 TCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAA 98782
Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865
|||||||||||| ||||| || || || ||||||||||| | | || ||||
Sbjct 98783 GTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCT 98842
Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925
||| || || || |||| | | | ||||||||| || ||||| ||| ||
Sbjct 98843 GCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCG 98902
Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATG 23957
|||||||| ||||| |||| | || |||||
Sbjct 98903 GCAAAGAATGCAAGGACATGGGTGATGAAATG 98934
>seq886
Length=61200
Score = 96.9 bits (106), Expect = 4e-15
Identities = 354/550 (64%), Gaps = 12/550 (2%)
Strand=Plus/Minus
Query 23530 CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTT 23589
|| ||||| | ||| || | || || || || | || || ||||||||||| || ||
Sbjct 12485 CCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAGCCAGGCATTAATCCACGCTTC 12426
Query 23590 TTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAG 23649
|| |||||||| || | || || || || || |||||||| || |||||||| ||||||
Sbjct 12425 TTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAAATGCCTTCAACAGCAGCAAAG 12366
Query 23650 GCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTA 23709
|| || ||||| || || | | | |||| ||||| | ||| |
Sbjct 12365 GCTACGAGACGCTCGCCGAAAACCGAGTGCTCATCACTGATCCAGCGCAGAGCCCACTCG 12306
Query 23710 GCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCA 23769
||||| || | || ||| || || || || | || || ||| ||| ||
Sbjct 12305 GCCTTGCGCTTGATGCAAGGAATGGTCTCGATAGCATCAAAAAGGAAATCACGTTCGACA 12246
Query 23770 TTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATA 23829
||| | || ||||| || || || | | || | ||||| ||||| || || ||
Sbjct 12245 GGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTCTCAGAGTGAATGTTCTCCATC 12186
Query 23830 GCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTT 23889
|||||| ||||| || || || | || |||| | || || || || | || | |
Sbjct 12185 ATAATCTGGAACCCGTAGAAGCAACGTGCCTCAGCGACCTGTACTTCGTTCGAGAAGCGT 12126
Query 23890 TTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA---TAT 23946
| | ||| ||||||||||| |||||| || |||||||| || || ||| |
Sbjct 12125 TCGAGAAGATTCTCGTTAACAATGCCATCAGAGGCGGCAAAGAACGCGAGGACACGGGAG 12066
Query 23947 TTTATAAAATGT---CTTTCA-TCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGA 24002
| | || || || ||| |||| | || ||||| |||| || ||||||||
Sbjct 12065 ATGAAGAATCGTTCGCTGTCATTCAGGCG----GTTGTTCCAGTCATGAAGGTCTTTTGA 12010
Query 24003 TAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAAT 24062
|||||| | || || | ||||| ||| ||| ||| ||| |||||| |||| ||
Sbjct 12009 TAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATAT 11950
Query 24063 ATCAT-TATG 24071
| || ||||
Sbjct 11949 CTGATATATG 11940
>seq1520
Length=48961
Score = 87.8 bits (96), Expect = 2e-12
Identities = 287/439 (65%), Gaps = 8/439 (2%)
Strand=Plus/Plus
Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568
|||||||| || || | |||||||| | || || | ||| || ||||| || ||
Sbjct 6190 CATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAAC 6249
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA-GCAAATGATCCGGAAAAGAA 23627
|| |||| |||||| |||||||| |||||||||| |||| || || |||||||| || ||
Sbjct 6250 CCAGGCAATAATCCACGTTTTTTGATCCAAAATA-TGCACGCGAAAGATCCGGAGAAAAA 6308
Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687
||| || || | || | || || || || ||| |||| || | | || ||
Sbjct 6309 AATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTGATCGTCTTC 6368
Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTT 23747
|||||| || || ||| || || ||| | || ||| ||||| || | |
Sbjct 6369 GATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACT 6428
Query 23748 TAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACAT 23807
|| | || | | ||| |||| ||||| || | ||| || ||| || |
Sbjct 6429 GAACAAGAATGATCGTTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGAGTAAGT 6488
Query 23808 TTCAGAATGAATATTTTCAATAGCAAT--CTGAAACCCATAAAAACATCTAGCTTCAGAC 23865
||| ||||| || ||||| || || | ||| || ||||| || ||| ||| ||||
Sbjct 6489 TTCTGAATGGATGTTTTCCAT--CATTGACTGGAATCCATAGAAGGATCGAGCCTCAGCG 6546
Query 23866 AATTGAACATCATTA-AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
| |||| ||| || | || | | | || |||||||| |||||||| || ||
Sbjct 6547 ACCTGAATTTCACTAGAGAAGTGACGGATC-AAGTTTTCGTTTACAATACCGTCGGACGC 6605
Query 23925 AGCAAAGAAAGCAAGAACA 23943
||| || || || || |||
Sbjct 6606 AGCGAAAAATGCTAGCACA 6624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521468163900200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |