Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2440 132 5e-26 seq2556 102 8e-17 seq886 96.9 4e-15 seq1520 87.8 2e-12 >seq2440 Length=22844 Score = 132 bits (146), Expect = 5e-26 Identities = 383/580 (66%), Gaps = 17/580 (3%) Strand=Plus/Minus Query 23499 AAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGA 23558 ||||| |||||| || || || || | || ||||| | ||| || | |||||| || Sbjct 14540 AAACAGTAAACAGGCGAAGTCGGTGTGCATTCCCTCATCACGACTGATGAGTTCATTTGA 14481 Query 23559 AAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCC 23618 ||| | | || ||||| | || | ||| || | ||| || ||||| |||||||| | Sbjct 14480 AAACGAAAGACCAGGCATAAGCCCCCTTTTCTTCAACCAGAAGATTGCGGCAAATGAACT 14421 Query 23619 GGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATT 23678 || || || | ||||||||||| ||||| || || || ||| |||| || || Sbjct 14420 AGAGAAAAAGAGTCCCTCAACAGCTGCAAATGCGACGAGCCGTTCCGCAAACGT---ATG 14364 Query 23679 ATAATCAGAA---ATCCAtttttttGTCCAATTAGCCTTCAATTTT--ACACACTCAATT 23733 || | ||| |||||||| | ||| | || || ||| | | | || Sbjct 14363 ATTGGCCGAATCGATCCATTTCAAAGCCCATGTTGCTTT--ATTGGCAATAGAAGGGATG 14306 Query 23734 GTTTCAATTGCTTTTAAGAGAAAAGTTTT-TTCTTCATTATCTGTTATATATGTATCAAT 23792 ||||| || || || | | ||||| || ||| | | | ||||| || | || Sbjct 14305 GTTTCGATGGCGGAAAATA-AGTGGTTTTGTTGTTCGGTGTTGGGAATATAGGTTTGGAT 14247 Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 || ||| |||||| || |||||||||||||| || || ||||| || || ||||| Sbjct 14246 AAGCAAAGAATACATCTCCGAATGAATATTTTCCATCATGATTTGAAAGCCGTAGAAACA 14187 Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912 | |||||||| | || ||| || ||||| | |||| ||||| || ||||| Sbjct 14186 ACGAGCTTCAGGAAGTTTAACCTCGGAGCAAAATTGCTGTACTAAGTTTTCATTGACAAT 14127 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTT 23970 ||| || ||||||||||| |||| |||| | || || | ||||||| || Sbjct 14126 ACCGTCCGCCGCAGCAAAGAACGCAATAACACGACAAACGAAGTGACGTTCATCATTATT 14067 Query 23971 GATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || | | | ||||| || || | ||||| || | ||| ||||| || ||||||||||| Sbjct 14066 GAGAGCTGTATTCCAGTCCTTGTTGTCTTTGGAGAGATCCACTTCTTCCACTGTCCAAAA 14007 Query 24030 ACTTGCCAAGGCACGCTTATACATTAGCCAAA--TATCAT 24067 | ||||| || || |||| | ||||| |||||| Sbjct 14006 AGATGCCACAGCCTTTTTGTACAGTTCCCAAATCTATCAT 13967 >seq2556 Length=115598 Score = 102 bits (112), Expect = 8e-17 Identities = 296/452 (65%), Gaps = 4/452 (1%) Strand=Plus/Plus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| || ||||| ||||| |||||||| | || || | || || ||| | |||| Sbjct 98485 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 98544 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627 || ||||| | || || || || | ||| || || | ||| || || || ||||| || Sbjct 98545 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 98604 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACG-TGTACCAAA-TGTTGCATTATAATCA 23685 || ||||| ||||| || || ||||| | | | | | ||| || | | || ||| Sbjct 98605 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTG--TCA 98662 Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745 || |||||||| | ||| | || || || | ||| |||||||| ||||| Sbjct 98663 GATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCG 98722 Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805 | |||||| | | || | | ||| | | |||||||| || || | | || Sbjct 98723 TCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAA 98782 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 |||||||||||| ||||| || || || ||||||||||| | | || |||| Sbjct 98783 GTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCT 98842 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 ||| || || || |||| | | | ||||||||| || ||||| ||| || Sbjct 98843 GCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCG 98902 Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATG 23957 |||||||| ||||| |||| | || ||||| Sbjct 98903 GCAAAGAATGCAAGGACATGGGTGATGAAATG 98934 >seq886 Length=61200 Score = 96.9 bits (106), Expect = 4e-15 Identities = 354/550 (64%), Gaps = 12/550 (2%) Strand=Plus/Minus Query 23530 CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTT 23589 || ||||| | ||| || | || || || || | || || ||||||||||| || || Sbjct 12485 CCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAGCCAGGCATTAATCCACGCTTC 12426 Query 23590 TTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAG 23649 || |||||||| || | || || || || || |||||||| || |||||||| |||||| Sbjct 12425 TTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAAATGCCTTCAACAGCAGCAAAG 12366 Query 23650 GCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTA 23709 || || ||||| || || | | | |||| ||||| | ||| | Sbjct 12365 GCTACGAGACGCTCGCCGAAAACCGAGTGCTCATCACTGATCCAGCGCAGAGCCCACTCG 12306 Query 23710 GCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCA 23769 ||||| || | || ||| || || || || | || || ||| ||| || Sbjct 12305 GCCTTGCGCTTGATGCAAGGAATGGTCTCGATAGCATCAAAAAGGAAATCACGTTCGACA 12246 Query 23770 TTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATA 23829 ||| | || ||||| || || || | | || | ||||| ||||| || || || Sbjct 12245 GGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTCTCAGAGTGAATGTTCTCCATC 12186 Query 23830 GCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTT 23889 |||||| ||||| || || || | || |||| | || || || || | || | | Sbjct 12185 ATAATCTGGAACCCGTAGAAGCAACGTGCCTCAGCGACCTGTACTTCGTTCGAGAAGCGT 12126 Query 23890 TTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA---TAT 23946 | | ||| ||||||||||| |||||| || |||||||| || || ||| | Sbjct 12125 TCGAGAAGATTCTCGTTAACAATGCCATCAGAGGCGGCAAAGAACGCGAGGACACGGGAG 12066 Query 23947 TTTATAAAATGT---CTTTCA-TCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGA 24002 | | || || || ||| |||| | || ||||| |||| || |||||||| Sbjct 12065 ATGAAGAATCGTTCGCTGTCATTCAGGCG----GTTGTTCCAGTCATGAAGGTCTTTTGA 12010 Query 24003 TAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAAT 24062 |||||| | || || | ||||| ||| ||| ||| ||| |||||| |||| || Sbjct 12009 TAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCATAT 11950 Query 24063 ATCAT-TATG 24071 | || |||| Sbjct 11949 CTGATATATG 11940 >seq1520 Length=48961 Score = 87.8 bits (96), Expect = 2e-12 Identities = 287/439 (65%), Gaps = 8/439 (2%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 |||||||| || || | |||||||| | || || | ||| || ||||| || || Sbjct 6190 CATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAAC 6249 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA-GCAAATGATCCGGAAAAGAA 23627 || |||| |||||| |||||||| |||||||||| |||| || || |||||||| || || Sbjct 6250 CCAGGCAATAATCCACGTTTTTTGATCCAAAATA-TGCACGCGAAAGATCCGGAGAAAAA 6308 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687 ||| || || | || | || || || || ||| |||| || | | || || Sbjct 6309 AATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTGATCGTCTTC 6368 Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTT 23747 |||||| || || ||| || || ||| | || ||| ||||| || | | Sbjct 6369 GATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACT 6428 Query 23748 TAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACAT 23807 || | || | | ||| |||| ||||| || | ||| || ||| || | Sbjct 6429 GAACAAGAATGATCGTTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGAGTAAGT 6488 Query 23808 TTCAGAATGAATATTTTCAATAGCAAT--CTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 ||| ||||| || ||||| || || | ||| || ||||| || ||| ||| |||| Sbjct 6489 TTCTGAATGGATGTTTTCCAT--CATTGACTGGAATCCATAGAAGGATCGAGCCTCAGCG 6546 Query 23866 AATTGAACATCATTA-AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924 | |||| ||| || | || | | | || |||||||| |||||||| || || Sbjct 6547 ACCTGAATTTCACTAGAGAAGTGACGGATC-AAGTTTTCGTTTACAATACCGTCGGACGC 6605 Query 23925 AGCAAAGAAAGCAAGAACA 23943 ||| || || || || ||| Sbjct 6606 AGCGAAAAATGCTAGCACA 6624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521468163900200