Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2933 141 7e-29 seq2786 127 1e-24 seq1 96.9 2e-15 >seq2933 Length=244213 Score = 141 bits (156), Expect = 7e-29 Identities = 161/213 (76%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| || |||||| |||||||||||||||| || ||| | || | Sbjct 208042 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCT 207983 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||| || | ||||||||| || | || | || ||||| ||| Sbjct 207982 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCT 207923 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| ||| || ||| | |||||||| | || || ||||||| |||||||| Sbjct 207922 GGATCTTCGCCTTTACATTGT--CAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGT 207865 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || ||||||||||| |||||||| ||||| Sbjct 207864 CTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 207832 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| || |||||||| || | || ||| | || || Sbjct 207584 ACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCG 207525 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | || || ||||| | ||| | || ||||| ||| | Sbjct 207524 AGCTGCTTGCCAGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGT 207465 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | || || ||||||| || ||||| || Sbjct 207464 ATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTG 207405 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| || |||||||||||| Sbjct 207404 CCCGTGAGGGTCTTAACAAAGATTTGCATG 207375 Score = 107 bits (118), Expect = 1e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || ||| || || || |||||||| | || ||| | || ||| Sbjct 207812 ACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCC 207753 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || ||||| || | ||| || || || | || | ||||||||| ||| Sbjct 207752 AACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGG 207693 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || ||| ||| || ||| | || ||||| | || || ||||| | || ||||||| Sbjct 207692 ATTTTCGCCTTGACATTGT--CAATAGTGTCAGACGACTCGACCTCAAGAGTGATCGTCT 207635 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||| ||||| |||||||| |||||| Sbjct 207634 TTCCCGTGAGTGTCTTGACGAAGATCTGCATG 207603 >seq2786 Length=9315 Score = 127 bits (140), Expect = 1e-24 Identities = 160/214 (75%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| || |||||| || || |||||||||| | || ||| | || | Sbjct 1528 CACCAAGGTGAAGAGTCGGCTCCTTCTGAATATTGTAATCGG-GCGT--GCGACCATCCT 1584 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||| || | ||||||||| || | || | ||| ||||| ||| Sbjct 1585 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCT 1644 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 || ||| ||| || ||| | |||||||| | | || ||||||| ||||||| Sbjct 1645 GGATTTTCGCCTTTACATTGT--CAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGC 1702 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||| ||||||||||| |||||||| |||||| Sbjct 1703 CTTTCCTGTGAGGGTCTTGACGAAGATCTGCATG 1736 >seq1 Length=474241 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 44128 CACCAGG-TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| | ||||| || ||| || || ||||| || || | || || | || | Sbjct 254580 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 254521 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||||||||||||||| || || | ||| | ||||| || ||| Sbjct 254520 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 254461 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| || ||| | || ||||| | || || ||||| | || ||||| Sbjct 254460 GAATCTTTGCCTTGACATTGT--CGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGT 254403 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | |||||||| ||||| ||||| Sbjct 254402 CTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 254370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359977049193531