Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2933 138 1e-27 seq1 105 6e-18 seq2786 89.7 5e-13 seq2578 82.4 7e-11 >seq2933 Length=244213 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||||||| | || || || || || ||||||||||||||| ||||| || Sbjct 207603 GCCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGA 207544 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || |||||||||||||| ||||| || || || ||||| || | || Sbjct 207543 AAGGGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAGATTAGTCGTTGTTGATCGGGAGG 207484 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||| ||| || | || || | ||| | | | ||||| ||||| | Sbjct 207483 AATGCCCTCCTTATCC-TGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGA 207425 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| || |||||||| ||||| || ||||| || || || |||||| Sbjct 207424 CCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCATG 207375 Score = 89.7 bits (98), Expect = 5e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| |||||||||||||| |||||||| Sbjct 207375 GCCTCCACGGAGACGAAGGACAAGGTGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGA 207316 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||| || | || ||||||||||| || || ||||| || || |||||||| Sbjct 207315 AAGGGTTCGACCATCTTCGAGCTGCTTCCCCGCAAATATAAGACGTTGTTGGTC 207262 >seq1 Length=474241 Score = 105 bits (116), Expect = 6e-18 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 41653 CACCA-GATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 ||||| |||| || || ||| ||||||||||||||||| || || || || | || | Sbjct 254580 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 254521 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | | |||||| || || || |||| ||||||||||| | |||| || || |||||| Sbjct 254520 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCC- 254462 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| | ||||| | || | | | |||||| ||||| ||||| | || ||||| Sbjct 254461 TGAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTC 254402 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| ||||| || || |||||||| Sbjct 254401 TTTCCGGTCAATGTCTTCACAAAGATCTGCAT 254370 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || || || || || ||||| || || Sbjct 254368 CCACCACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAA 254309 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| || || || || || || |||||||| | || Sbjct 254308 AGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGG 254249 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814 | | |||||| ||| ||| | ||||| | || | || | | || ||||||||| Sbjct 254248 ATACCCTCCTTATCC-TGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCAC 254190 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || |||| ||||| || || |||||||| Sbjct 254189 CTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 254142 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || |||||||| || |||||||||||||| ||||| || Sbjct 254140 CCACCACGAAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAA 254081 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||| ||||| ||||| || |||| |||||||| || | ||| Sbjct 254080 AGAGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATCAATCGCTGTTGATCAGGAGGA 254021 Query 41756 ACGCT 41760 | ||| Sbjct 254020 ATGCT 254016 >seq2786 Length=9315 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/194 (71%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||||||||| || || |||| | ||||| | || || | ||||||||| || || Sbjct 1547 CTCCTTCTGAATATTGTAATCGG---GCGTGCGACCATCCTCCAACTGCTTGCCAGCAAA 1603 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||| ||||| | || | | |||||||||| || |||| || | || Sbjct 1604 AATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCC-TGGATTTTCGCCTTTACAT 1662 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| | |||| ||||||| || |||| || || || || ||||| | Sbjct 1663 TGTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTTTCCTGTGAGGGTCTTGA 1722 Query 41850 CGAAAATCTGCATG 41863 |||| ||||||||| Sbjct 1723 CGAAGATCTGCATG 1736 >seq2578 Length=112811 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || ||||| ||||||||||||||||||||||| || || || | || ||| Sbjct 100782 ACCAAGTGGAGCGTCGATTCCTTCTGAATGTTATAGTCGGAAAGAGTTCGTCCATCTTCG 100723 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAA 41756 || ||||| |||||||| |||| || ||||| || | ||||| Sbjct 100722 AGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCAGGGGGAA 100680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462286415111600