Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq482 168 7e-37 seq109 125 7e-24 >seq482 Length=177074 Score = 168 bits (186), Expect = 7e-37 Identities = 310/452 (69%), Gaps = 2/452 (0%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||||||||| ||| ||||| ||||| |||| |||||| || ||||| ||| ||||| Sbjct 124114 AGACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTT 124173 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| || || |||||||||||||| || | ||| || ||||| ||||| Sbjct 124174 AGGCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAA 124233 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATC-TTTATT 16377 || || ||||| |||| || || || | |||| || || | || || || ||| | Sbjct 124234 AAGATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGT-GCTTCGTTTGTC 124292 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 | |||||||| | |||| |||||||| | || || || || |||||||| || Sbjct 124293 AGATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 124352 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 | || | | | || | || ||| | | || ||||| || || | | ||| Sbjct 124353 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 124412 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| || || | ||| || || ||| || || ||||| ||| | || ||||| || Sbjct 124413 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 124472 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 | ||| ||||| |||| || ||| ||| || || ||||||||||||||| || Sbjct 124473 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 124532 Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649 ||||| || || | | ||| | ||||||| Sbjct 124533 GGCAAAGAATGCAAGGACGTGGGTGATGAAAT 124564 >seq109 Length=35798 Score = 125 bits (138), Expect = 7e-24 Identities = 296/440 (67%), Gaps = 8/440 (2%) Strand=Plus/Plus Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255 || ||||| || || ||| ||| | |||||| || | ||| || ||||| || ||||| Sbjct 2875 ATAAGACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAAT 2934 Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA-GCAAATGACCCCGA 16314 || || || ||||| |||||||||||| | ||| ||||| ||| ||||| ||| | || Sbjct 2935 GTCAAACCCGGCATCAATCCTCGTTTCTTCATCCAAAATAT-GCAGGCAAACGACGCAGA 2993 Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT-T 16373 || || || || || | | |||||| || | || || || || | || | || | | Sbjct 2994 GAAAAAAATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGT-GAATTTAT 3052 Query 16374 TATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTA 16433 ||| ||||||| | | |||||| |||||| || || || || ||||| | Sbjct 3053 TATCTTGAATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAA 3112 Query 16434 TGGCCTTAAACAATTTC--TCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAA 16491 | | || || || || | | | || || |||| ||||| || | ||| || || Sbjct 3113 TAGAGTTGAATAACATCGAACGCTCTGGTGCATTTCGA--ATATATGTTTGAATAAGCAA 3170 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 | ||| |||| || || || ||||| || ||||| || |||||||| || || || Sbjct 3171 AGAGTAGGTTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACACCGCGC 3230 Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 ||||| | |||| ||| | |||| | ||| ||||| || || ||||| || Sbjct 3231 CTCCGGCACCTGTATTTCGTTGGAAAAATGACAAATCAGATTCTCGTTTACAATACCATC 3290 Query 16612 ACTTGCAGCAAAAAACGCCA 16631 |||||||| ||||||| Sbjct 3291 CGACGCAGCAAAGAACGCCA 3310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511401927881320