Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq344 91.5 2e-13 >seq344 Length=30398 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 52844 AGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGT 52903 ||||| |||||||| ||||| | || |||||||| |||||||||||||||||||| Sbjct 13310 AGATAATACATTCCAGTTTTCAAGCCTTTTCTCCATCCATAAAAATGCATACTTGTTAGC 13251 Query 52904 TTGGA---ATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAG 52960 | || ||| | ||| || | ||| ||||||| | |||||||| |||||| Sbjct 13250 T--GACCCATAGAT-GGAGAGGCAAGATGAATATTCAAACTCTGACTTTGGCAGATGAAC 13194 Query 52961 GCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTA 53020 || || | || | || | | | ||||| ||||| | ||||||||||| |||||| Sbjct 13193 GCGCCACGATCCACGGCAAGGTCCAAAATCGTTTTTTGAGAAATTTCCCAAACCGTTTTA 13134 Query 53021 TAAAC 53025 ||||| Sbjct 13133 TAAAC 13129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593707120614480