Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq482 140 3e-28 seq109 122 8e-23 >seq482 Length=177074 Score = 140 bits (154), Expect = 3e-28 Identities = 294/432 (68%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 |||||| ||||| ||| | || ||||||| || || || ||||||||| | |||| Sbjct 124116 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 124175 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 || ||||||| || || || |||||||| || || | |||||| || || ||||| || Sbjct 124176 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 124235 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT-TTTGTTCG 14381 |||||||| || ||||| || || | |||| ||| |||| | ||||| ||||| | Sbjct 124236 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAG-TGCTTCGTTTGTCAG 124294 Query 14382 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14441 |||||||||| ||||| || | ||| || || | |||||||| || || | Sbjct 124295 ATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGT 124354 Query 14442 TAAATAAATGTTC-CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499 || | || | | | | || || | |||| | ||||||||| ||||| | || Sbjct 124355 CGAAGAGATATGCGCGTTGATTAAGATCCTTG--ACGTATGTATCGATAAGCAGAGAGTA 124412 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 ||||||| || | ||||||||| ||| || || |||||||| | | || || | Sbjct 124413 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 124472 Query 14560 CCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 ||| || || |||| | || || |||||| || || ||||| ||| || Sbjct 124473 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 124532 Query 14620 TGCAAAAAATGC 14631 ||||| ||||| Sbjct 124533 GGCAAAGAATGC 124544 >seq109 Length=35798 Score = 122 bits (134), Expect = 8e-23 Identities = 244/354 (69%), Gaps = 6/354 (2%) Strand=Plus/Plus Query 14197 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 14256 ||| | ||| ||||| || ||| | || ||||| | ||||| ||||| |||||||| Sbjct 2874 AATAAGACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAA 2933 Query 14257 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA-GCGAATGATCCGG 14315 ||| || || ||||||||||||||||| || | |||||||| |||| || || || | | Sbjct 2934 TGTCAAACCCGGCATCAATCCTCGTTTCTTCATCCAAAATA-TGCAGGCAAACGACGCAG 2992 Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14375 | || || || || || | || ||||| |||| || || ||| |||| | ||| | Sbjct 2993 AGAAAAAAATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTAT 3052 Query 14376 TGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 | | | || ||||| | ||||||| | |||| | || || | || |||||| Sbjct 3053 TATCTTGA-ATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCA 3111 Query 14435 ATAGCATTAAATAA-ATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAA 14493 |||| || ||||| || | |||| | | || ||| ||||| | |||||| || Sbjct 3112 ATAGAGTTGAATAACATCGAAC-GCTCTGGTGCATTTCGAATATATGTTTGAATAAGCAA 3170 Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547 || ||||||| || || || ||||| ||||| |||||||| ||||| Sbjct 3171 AGAGTAGGTTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACA 3224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482333836796680