Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq482 194 1e-44 seq35 118 9e-22 seq1072 114 1e-20 seq51 114 1e-20 seq338 104 2e-17 seq250 100 3e-16 seq344 89.7 5e-13 >seq482 Length=177074 Score = 194 bits (214), Expect = 1e-44 Identities = 397/581 (68%), Gaps = 27/581 (5%) Strand=Plus/Minus Query 57560 ATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGA 57619 |||||||| || || | |||||||| || |||||||||||||| |||||| ||||| Sbjct 124681 ATATCCAGCTAT--GGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGA 124624 Query 57620 AGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC--TCAAAGAATCT-GAGAGAAA 57676 | ||||| || | ||||| ||| ||| | | | ||| ||| ||| | | Sbjct 124623 GATTGACCTCACTCATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCA 124564 Query 57677 TTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTT 57736 ||| || | ||||| | || || || ||||| || || ||||| || ||||| ||| | Sbjct 124563 TTTCATCACCCACGTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCT 124504 Query 57737 GGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCA 57796 | | || | |||||| | |||||||||| | |||||| | | |||||| || || || Sbjct 124503 GTTGGAGCGCTTTTCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCA 124444 Query 57797 AGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAA 57856 | | || |||||||| ||||| |||| || || || || |||||||| ||||| || Sbjct 124443 AATAATGATGGAAAACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAA 124384 Query 57857 GGAC----AACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCG 57912 ||| | | ||| | | || || ||| |||| || |||||||| || ||| Sbjct 124383 GGATCTTAATCAACGCGCA---TAT-CTCTTCGACGCAATAGAAACAATACCGTGCATC- 124329 Query 57913 CCAAG---AAGGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTC 57965 ||| || || || ||| | ||||||||||| | || || | | ||| || Sbjct 124328 --AAGCGCAAAGCCGACTGGGCCCTCAAATGGATATCTGACAAACG--AAG--CACTTTT 124275 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || ||||| | | || ||||| || ||||| || || || ||||| || || || Sbjct 124274 GCAGAGAGATTGGTGGCATTCGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCT 124215 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| | ||||| |||||||||||||| ||||| || | | |||||| | Sbjct 124214 TCCATTTTCTGGTTAAAGAAGCGCGGCCTGATGCCTGGCCTAACTTATTCAAACGAGCTC 124155 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 || || || || ||| | ||||| ||||| ||||| || Sbjct 124154 ATCAGCCGAGATGAAGGTTTACATACCGATTTCGCGTGTCT 124114 >seq35 Length=211330 Score = 118 bits (130), Expect = 9e-22 Identities = 294/443 (66%), Gaps = 24/443 (5%) Strand=Plus/Plus Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 ||||| || ||||| || ||||| ||||| ||||||||| | ||||| | || || | Sbjct 159689 GCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAACGCTTCTCGAAC 159748 Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 ||||| || || | |||||| | ||||| ||||| || || | || || ||| | Sbjct 159749 GAAGTACAGGTCGCTGAGGCGCGTTGCTTCTACGGGTTCCAGATTATGATGGAGAACATT 159808 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || || || | || || || |||||||| || ||| | || ||| | ||| |||| Sbjct 159809 CACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTCGA---ACGT 159865 Query 57876 AGA----CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTG 57928 || || || | || ||||| || || || ||| ||| ||||| ||||| Sbjct 159866 -GATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATC---AAGCGCAAGGCCGAGTG 159921 Query 57929 GTCAATCAAATGGATAAAAAGCGCCACGGCCACG-----TTCGCCGAGAGGCTAATCGCG 57983 | | | ||||| | | ||| ||| |||| |||| | || | || Sbjct 159922 GGCTCTGCGCTGGATCA-----GTGACGAACACTCGGTTTTCGGCGAGCGTCTCGTAGCC 159976 Query 57984 TTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAG 58043 || || || || ||||| || ||||| || ||| ||| ||| | || |||||||||||| Sbjct 159977 TTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGAAG 160036 Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 || || || | ||||| ||| || |||| |||||| | || || || |||||| Sbjct 160037 AAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGGGT 160096 Query 58104 CTCCATACTGATTTTGCGTGCCT 58126 | ||||| || || || ||||| Sbjct 160097 ATGCATACCGACTTCGCCTGCCT 160119 >seq1072 Length=303801 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || ||||| || ||||| || | || ||||| |||| Sbjct 211032 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCG 210973 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || || ||||||||| ||| | ||||| |||||| Sbjct 210972 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 210913 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| |||||||| || | || | |||||| ||| Sbjct 210912 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 210853 Query 31373 ATTCAAAAAGAATCGACTCTTCATCT 31398 || || || || ||||||||||| || Sbjct 210852 ATCCAGAAGGAGTCGACTCTTCACCT 210827 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || |||||||| | || ||||| |||| Sbjct 211261 CATGCAGATCTTCGTCAAGACACTCACGGGAAAGACGATCACTCTTGAGGTTGAGTCGTC 211202 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | || || || ||| |||||||||||| | ||||| ||||| Sbjct 211201 TGACACTATTGACAATGTTAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGACCA 211142 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || |||||||| |||||||| || | || | ||||| || Sbjct 211141 ACAACGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAA 211082 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || || || || || ||| | || | || |||| Sbjct 211081 TATTCAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTTCGAGGAGGTA 211032 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || |||||||||||||| | || || || | || Sbjct 211489 CATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTC 211430 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | ||| ||| ||||| ||| | || ||||| || Sbjct 211429 AGACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 211370 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 || || ||||| ||||| ||||| ||| | ||||| | | | || | || || | Sbjct 211369 ACAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGA-TGGACGCACCCTTTCTGACTACA 211311 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||||| || || || || ||||| || || ||| Sbjct 211310 ACATTCAGAAGGAGTCAACCCTTCACCTTGTTCTT 211276 >seq51 Length=295103 Score = 114 bits (126), Expect = 1e-20 Identities = 217/314 (69%), Gaps = 4/314 (1%) Strand=Plus/Minus Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683 |||||||| ||| | ||||| |||| || || | |||||| || |||||||| || Sbjct 220422 CCTATGCCACCGGCTGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCGTAGATACCT 220363 Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA-CACGAAGACATTTGCGCTTTGGGCGT 23742 ||||| || ||||| | || | |||| || || || |||||||| | || || Sbjct 220362 TCGATAGAATCATCTTTCAT-GCAAACAAGGAAGCATGAGGACATTTGAGGCGAAGGGGT 220304 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802 | |||| ||| || || || |||| || || || |||| | ||||| || ||||| Sbjct 220303 ACCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAAATATCGCTCGGACATGAGGTTGTA 220244 Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862 || | | | | ||||| || ||||||||||| || | ||||| ||||| ||||| Sbjct 220243 TGTTTGCAAGACATGCTCAATATCGTCTCCGTGTATCCCAACAGCGACCCGCATGATCAT 220184 Query 23863 GTATTGAGGTCTCTCGACCGTGACG-CCGTTAATTTTGAACAGATATGAACGTTGCATCG 23921 | ||| || | ||| | | ||| ||||||| | || ||||| |||| || | Sbjct 220183 ATGTTGTGGCCGCTC-AGCAATACGACCGTTAAGGCGAATGAGGTATGACCGTTCCAAGG 220125 Query 23922 TTTTAAATCCAAAA 23935 |||||||||||||| Sbjct 220124 TTTTAAATCCAAAA 220111 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || |||||||| ||||||||||| ||||| | || ||||||||||| ||||||||||| Sbjct 220748 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 220689 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||||| ||||||| | | | || | || |||||||| || ||||| || | Sbjct 220688 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 220629 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || || || || | ||| || || || || ||||| || || || || |||||| Sbjct 220628 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 220569 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 | | ||||| ||||| | ||| || || Sbjct 220568 GCCCGAAGCATTGGCACAATACCATTCGA 220540 >seq338 Length=27447 Score = 104 bits (114), Expect = 2e-17 Identities = 227/338 (67%), Gaps = 4/338 (1%) Strand=Plus/Plus Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 ||||||||||| || | || || ||||| || | ||||| |||| || || Sbjct 3298 GCTCGAACGTTATGTATACTCAATCCGATGCCGCCAGCTGATTTGCTAATCAAAGCACAA 3357 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 | |||||| || || || || || |||||| ||| || || | | | |||||| || Sbjct 3358 TTTTTCAGCGTATCATAAATACCATCGATGGAGTCGTCCTTCATGGACATCAAGAAGCAA 3417 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 || |||||||| ||| | || |||| ||| || || || | || || | ||| Sbjct 3418 GACGACATTTGAGCTGAAGTGGTCCCGGCATTGAAAAGGGTTGGTGTCGCATGAATGAAG 3477 Query 23780 TATCCATTCGACATTAGATTGTACG--TGTCGATGGCGGCATCAATGTCCTCTCCGTGTA 23837 ||| |||||||||||||| || | ||| || || ||||| || ||||| |||| Sbjct 3478 AATCGGTTCGACATTAGATTATAGGTCTGTAGAACACG--TTCAATATCATCTCCATGTA 3535 Query 23838 TACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTT 23897 | || || || || ||||| | ||| | ||| |||| ||| | | ||||| || Sbjct 3536 TTCCAATAGCCACACGCATGAACATATGTTGCGGTCGCTCAGCAACGCGTCCGTTGATAC 3595 Query 23898 TGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAA 23935 | || ||| |||||||| | |||||| |||| ||| Sbjct 3596 GAAGCAAATAAGAACGTTGTAGTGTTTTATATCCGAAA 3633 >seq250 Length=164446 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || || |||||||| | || || || | || Sbjct 133713 ATGCAGATCTTTGTGAAGACATTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCTTCT 133772 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| || ||| | |||||| |||||| | || |||||||| Sbjct 133773 GACACTATCGACAATGTCAAGGCAAAGATTCA-GGACAAAGAAGGCATTCCTCCCGACCA 133831 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || || ||||| || |||||||| || | || | || ||||| Sbjct 133832 ACAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAA 133891 Query 31372 CATTCAAAAAGAATCGACTCTTCATCT 31398 |||||| ||||| || || |||||||| Sbjct 133892 CATTCAGAAAGAGTCTACCCTTCATCT 133918 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || || || |||||| | || || || |||| Sbjct 133485 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTCT 133544 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || || ||| | ||| ||||| || | || || ||||| Sbjct 133545 GATACCATTGACAATGTGAAGGCAAAGATTCA-GGATAAGGAGGGTATCCCTCCTGACCA 133603 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || ||||| || ||| | ||||| ||| | |||||||| Sbjct 133604 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 133663 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||||||||||||||||||||| || || Sbjct 133664 TATCCAAAAAGAATCGACTCTTCATCTTGTTCT 133696 >seq344 Length=30398 Score = 89.7 bits (98), Expect = 5e-13 Identities = 191/279 (68%), Gaps = 11/279 (4%) Strand=Plus/Minus Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564 ||| | ||||||||| |||||||| || ||||||||| || || || || |||||| Sbjct 12909 GTGTAAGGTTCGAAACATTCATTGAAGCCAAGTATCTGACTCGTAGACGCAGTAGGCATC 12850 Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGAC 22624 || || | || | ||||||||||| ||| || ||||| || ||| ||| | | | Sbjct 12849 GGTGCAACAAGCAACGAGTTTCTCATGCCATGTTTTGAGATATTATCCTTTAATACACTC 12790 Query 22625 CAGTCCCACAGA-TCGGACGGCGTCACATTGTCCCACATATCGTATTGCAAC--ACGCCG 22681 || ||||||| | | | | ||| | || | |||||| |||| | |||||| || | | Sbjct 12789 CAATCCCACAAATTTGTAGGGCAT-AC---GCCCCACAAATCGAACTGCAACTTACCCTG 12734 Query 22682 C-GACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCA 22740 | || || || || ||| | || |||| ||||||| || || | ||||| Sbjct 12733 CTGA---GCAGGACTACCTCTCCAAGTCGCGTAAGGACCATCCGTCATTGCGATCTCGCA 12677 Query 22741 GCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGAT 22779 || ||||| | || |||| ||||| || ||||| || Sbjct 12676 ACTTGCCTCGCATGCTCCGTGGTATATTGTTTCGAATAT 12638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755528871920