Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq250 89.7 4e-13 >seq250 Length=164446 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 43912 CACCAA-ATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGT 43970 |||||| ||| || || |||||| ||||| ||||| || | ||| |||| | Sbjct 133923 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 133864 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 |||| || ||||| ||||| ||||| || || ||||| |||| | |||||||| || Sbjct 133863 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 133804 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||| ||| ||||| | | | ||| || | | ||| || || | || || || | Sbjct 133803 GAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCT 133744 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | ||||| || ||||||||||| || ||||| Sbjct 133743 TTCCGGTCAATGTCTTCACAAAGATCTGCAT 133713 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAAT-CGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||||| |||||||||| || | || || |||| || | || ||||| ||||| Sbjct 133675 TCTTTTTGGATATTATAATCCGAAAGAGTG-CGGCCATCTTCTAGCTGCTTTCCAGCAAA 133617 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 || | ||||| ||||| |||| | ||| || ||||| ||| ||| || || | Sbjct 133616 GATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTTGCCTTCACATT 133557 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 ||| ||||| | || |||||| || | || || || || ||||| |||||||| || Sbjct 133556 GTCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGAC 133497 Query 44110 AAATATTTGCAT 44121 ||| || ||||| Sbjct 133496 AAAGATCTGCAT 133485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354769164164748