Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq250 127 2e-24 seq1072 91.5 1e-13 >seq250 Length=164446 Score = 127 bits (140), Expect = 2e-24 Identities = 158/213 (74%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 94798 CACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATC 94854 ||||||| || | ||||| || || || | |||||| || | || || || ||| Sbjct 133923 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAG--AAAGCGTACGACCATC 133866 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 ||||| ||| ||||| ||||||| || | || || || |||||||| ||||||||||| Sbjct 133865 CTCCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTC 133806 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | ||| ||||||||||| | ||| |||||||| ||||| |||| ||||| || Sbjct 133805 CTGAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGT 133746 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | || ||||||||||||||||| Sbjct 133745 CTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 133713 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| || | ||| ||||| ||||| | |||||||| | |||| | ||| || | Sbjct 133692 CAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTCTA 133633 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| ||||| ||||||| | | ||| || || ||||| ||||| || || || | || Sbjct 133632 GCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTGAA 133573 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | |||||||| || | | | || |||| || || || | |||||||| |||| Sbjct 133572 TCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTCTTTC 133513 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||| || |||||||||||||| Sbjct 133512 CGGTCAAAGTCTTGACAAAGATCTGCAT 133485 >seq1072 Length=303801 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| || || |||| || | | ||| || || || ||||||||||| || Sbjct 211105 ATCCTCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTT 211164 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||||| ||||| || | | | |||||||| || || |||| ||||| Sbjct 211165 GTCCTGGATTTTCGCCTTAACATTGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGAT 211224 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| || || || || || ||||||||||||| Sbjct 211225 CGTCTTTCCCGTGAGTGTCTTGACGAAGATCTGCATGC 211262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448280267298360