Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq109 109 6e-19 seq35 91.5 2e-13 seq482 84.2 2e-11 >seq109 Length=35798 Score = 109 bits (120), Expect = 6e-19 Identities = 168/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| ||||| || ||||| |||||||| | || || | |||||| |||||||| || Sbjct 2880 ACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAATGTCAA 2939 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 ||| ||||| ||||||| || || | ||||||||| | ||||| | | || || || Sbjct 2940 ACCCGGCATCAATCCTCGTTTCTTCATCCAAAATATGCAGGCAAACGACGCAGAGAAAAA 2999 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAA 21654 |||||| || | || |||||||| || || || || | | || ||| ||||| Sbjct 3000 AATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTATTATCTTG 3059 Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCT-TTAATACAATCAATTGTATCAATAG 21710 ||||| | |||||||||| ||||||| || || || ||| || ||||||| Sbjct 3060 AATCCACTGAAGCGCCCATTTTG-CTTTTCTATTGATGCACGGAATAGTTTCAATAG 3115 >seq35 Length=211330 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 ||||| ||| ||||| | ||| || | || || || || | || || ||||||||||| Sbjct 160102 ATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAGCCAGGCATTAATCC 160043 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 | ||| || | |||||| || ||||| || | || || ||||||||||| ||||| || Sbjct 160042 ACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAAATGCCTTCAACAGC 159983 Query 21610 AGCAAATGCAACTAATCGTTCACCG 21634 |||||| || || | || || ||| Sbjct 159982 AGCAAAGGCTACGAGACGCTCGCCG 159958 >seq482 Length=177074 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| || ||||| ||| ||||||||||| | || || | || || ||| | |||| Sbjct 124116 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 124175 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 || ||||| | || | ||| |||||||| || || || || || | || ||||| || Sbjct 124176 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 124235 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTC-TTTATCCA 21653 || ||||| || ||||| ||||| || |||| || | | || | ||| ||| || Sbjct 124236 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGT-GCTTCGTTTGTCAG 124294 Query 21654 ATATCCATTT 21663 |||||||||| Sbjct 124295 ATATCCATTT 124304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531887828269240