Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1072 89.7 5e-13 seq250 84.2 2e-11 >seq1072 Length=303801 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||||||| | ||||| ||||| | ||||||||| Sbjct 210836 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 210895 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || | || | |||||||||||| || || || || || ||||| ||| ||| ||| Sbjct 210896 GCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTT 210955 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||| | || | |||| || || || || || || Sbjct 210956 ACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTCCTGTGAGGGTC 211015 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 211016 TTGACGAAGATCTGCAT 211032 >seq250 Length=164446 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||||| || ||||| || || ||||| Sbjct 133711 CCACCACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAA 133652 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || ||||||||||| || || |||| | ||| || ||||| |||||| Sbjct 133651 AGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGG 133592 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| | | || ||| | | || | ||||| | ||||| | Sbjct 133591 ATACCCTCCTTATC-CTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCAC 133533 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| | ||| || || || |||||||| Sbjct 133532 CTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 133485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | ||| ||||| || |||||||| || || | || || ||||| | ||| Sbjct 133916 ATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTG 133857 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || || |||| |||||||| ||||| ||||| || ||||||||||| ||| | | Sbjct 133856 CTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTC-CTGAATCT 133798 Query 131151 CTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGG 131209 || ||||| | || | ||| || | ||||||| || | || | || || |||| Sbjct 133797 TTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCGG 133738 Query 131210 TTAGAGTTTTTACGAAAATCTGCAT 131234 | | || || || || |||||||| Sbjct 133737 TCAATGTCTTCACAAAGATCTGCAT 133713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472001288787840