Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq482 208 8e-49 seq109 172 6e-38 seq35 159 4e-34 >seq482 Length=177074 Score = 208 bits (230), Expect = 8e-49 Identities = 389/561 (69%), Gaps = 13/561 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAAT--GTTA 93149 ||||| || ||||||||||||||||| ||||| || | ||| || ||||| |||| Sbjct 124117 CACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTT--TGAATAAGTTA 124174 Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209 || || | ||| || || ||||| | ||| || || ||||| || |||||||||| Sbjct 124175 GGCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAA 124234 Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGC 93269 | || || || || || || |||||||| | | || |||||| | || || | | Sbjct 124235 AGATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGT-GCTTCGTTTGT-C 124292 Query 93270 TGAT--CCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 ||| |||||| | ||||| |||||||| ||| || || |||| |||||| || || Sbjct 124293 AGATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 124352 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || || || | || | | ||| | |||||||||||| | |||||| || Sbjct 124353 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 124412 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG- 93446 |||||||||| || || ||||| |||||||| || || || | | || || | Sbjct 124413 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 124472 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 || | |||||||| | ||||| | ||| | |||||||| || || ||||| || || | Sbjct 124473 TGCT-TGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGG 124531 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCA-TCTTTAA--GCTTAT 93563 | ||||| || || | | || | || ||||| ||| ||| | ||||| ||| | Sbjct 124532 CGGCAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGT 124591 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| ||| ||||| | | || || | ||||| ||||| ||||||||||||| Sbjct 124592 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 124651 Query 93624 CTTTTTTGTACATATCCCATA 93644 |||| |||||||| | ||||| Sbjct 124652 CTTTCTTGTACATCTGCCATA 124672 >seq109 Length=35798 Score = 172 bits (190), Expect = 6e-38 Identities = 380/558 (68%), Gaps = 14/558 (3%) Strand=Plus/Plus Query 93088 TAAG-CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATG 93146 |||| || ||||| |||||||| | ||||| || | || | ||||| |||| Sbjct 2876 TAAGACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAATG 2935 Query 93147 TTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC-CAGaa 93205 | ||||| || | || |||||||||||| | |||||||| || || |||| || |||| Sbjct 2936 TCAAACCCGGCATCAATCCTCGTTTCTTCATCCAAAATA-TGCAGGCAAACGACGCAGAG 2994 Query 93206 aaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA 93265 ||||| || ||||| | ||||||||||| || | ||| || |||||| | |||| Sbjct 2995 AAAAAAATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTATTA 3054 Query 93266 CTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGAT 93324 | || ||||| | | ||||| | |||||| | || || || || | ||||| || Sbjct 3055 -TCTTGAATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAAT 3113 Query 93325 AGCGTTAAATAGGTAATC--TCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 || ||| |||| ||| ||||| | || ||| || ||||| | || | || | Sbjct 3114 AGAGTTGAATA--ACATCGAACGCTCTGGTGCATTTCGAATATATGTTTGAATAAGCAAA 3171 Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442 || || |||||||||| | ||||||||| ||| ||||| || |||||||| | || Sbjct 3172 GAGTAGGTTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACACCGCGCC 3231 Query 93443 TCCGTGATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 |||| | ||| | ||| ||| ||||| | | ||||| || || || |||||||| Sbjct 3232 TCCGGCACCTGTATTTCGTTGGAAAAATGAC-AAATCAGATTCTCGTTTACAATACCATC 3290 Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG--- 93558 || || ||||| || |||| | | | || |||||||| | | || || Sbjct 3291 CGACGCAGCAAAGAACGCCAGGACGCGAGAAACGAAGAATTTCTCATTAGCGTTGAGTTT 3350 Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 |||| ||| ||| | || || |||||||| | ||||| ||||| || || | Sbjct 3351 GTTATTCCAGTCGTTGATGTCATTCGAAAGATCAATCTCTTCCGATGTCCAGAATGACGA 3410 Query 93619 TTCTGCTTTTTTGTACAT 93636 || |||||||||||||| Sbjct 3411 TTGAGCTTTTTTGTACAT 3428 >seq35 Length=211330 Score = 159 bits (176), Expect = 4e-34 Identities = 374/560 (67%), Gaps = 7/560 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || ||||||||||| | ||| || || || || | ||| || ||| | || Sbjct 160117 GCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAA 160058 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | | ||| || ||||| | |||||| || || || || ||||| || || Sbjct 160057 GCCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAA 159998 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || ||||| || || ||||| || || | ||| ||| | ||| | | | || Sbjct 159997 AATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGTTCGTCACT 159938 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| | |||||| ||||| || ||| || ||||| | || |||||||| | Sbjct 159937 GATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGCATC 159878 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||| ||| |||| || ||| | | ||| |||||||| ||||| | ||||| || | Sbjct 159877 AAAAAGGAAATCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGT 159818 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || || || | |||||||| ||| ||||| |||||||| || | || || | || Sbjct 159817 CTCGGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGCGCCTCAGCGAC 159758 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 ||| ||||| | || || | || | ||||| || ||||| || ||||| || || || Sbjct 159757 CTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTGACAATGCCATCAGAGGCGGC 159698 Query 93511 aaaaaaaGCCAATATATGCTTTAT--AAAATGTTTCTC-ATCATCTTTAAGC--TTATCC 93565 ||| || || | | | | || | ||| ||| | ||| || | || || | | Sbjct 159697 AAAGAACGCGAGGACACGGGAGATGAAGAATCGTTCGCTGTCA--TTCAGGCGGTTGTTC 159640 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || || |||||||| | ||| | ||||| ||||||| || || || || || Sbjct 159639 CAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCTCGGCC 159580 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| | |||||| Sbjct 159579 TTCTTGTACATTTGCCATAT 159560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556847219557240