Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02]
1,951 sequences; 39,922,873 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq36 107 2e-18
>seq36
Length=145515
Score = 107 bits (118), Expect = 2e-18
Identities = 211/302 (70%), Gaps = 14/302 (5%)
Strand=Plus/Minus
Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATC-GTGCGGATTATTTTTTAT----TAAAT 20468
|| ||||| || | ||| || ||||||||||| ||| ||||| | ||| || | ||
Sbjct 15655 GGATTCCAAGCGCTCATGATTATTCTTCTATCAGTG-GGATTCTCTTTAATCTTCTGGAT 15597
Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528
|| | ||| |||||| |||| || || || |||||||| | || |||| ||
Sbjct 15596 GCA---TTCACG-CAATTGATCAACGCCTTGTCCAGTATAGTCTCCGTCGCAGTCCTTGT 15541
Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTC 20588
|| | || || || || ||||| ||||| || || ||||| ||||||||||| || | |
Sbjct 15540 ACTCTGCGCCGAAATGTCTCCATTGGAATCCATACACAGGACCCAAATCCCCTTCACGCC 15481
Query 20589 TGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648
| ||| | || || || || ||| ||| | | || || ||| |||||||||||||
Sbjct 15480 TATGCCCAAGTCCACGGCCTTCCAAGAAGGCTTTCGAACCGTTTCCATCCCATATCTTGA 15421
Query 20649 CTCCTGTTCT-TGA-AAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTC 20706
| ||| |||| || ||| | | |||| || |||| || | | ||||| ||||| ||
Sbjct 15420 CGCCT-TTCTGCGACAAGAT-CGTGGAATCGGTACAGCCATGGACGAACCAGAGCAGTTC 15363
Query 20707 TT 20708
||
Sbjct 15362 TT 15361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441362036020840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |