Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1072 129 7e-25 seq250 87.8 2e-12 >seq1072 Length=303801 Score = 129 bits (142), Expect = 7e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | || ||| | || || || | || |||||| || || |||||||| | Sbjct 211260 TGCCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAG 211319 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || |||||||||||||||||||| || | || || || |||| | Sbjct 211320 AAAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAG 211379 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || |||||| ||| ||||| ||| | ||| | | | |||||| || || Sbjct 211380 GAATGCCCTCCTTATCCTGTATCTTGGCCTTCA-CGTTGTCGATCGTGTCTGAAGACTCG 211438 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct 211439 ACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 211488 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| | || || | ||||||||| || || Sbjct 210841 CTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAA 210900 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | ||| | || |||||||||| ||||||| ||| | | Sbjct 210901 AATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTTACATT 210960 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||| || || |||| || || || || || || || || || || Sbjct 210961 GTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTCCTGTGAGGGTCTTGAC 211020 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 211021 GAAGATCTGCAT 211032 >seq250 Length=164446 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || ||||||||||| || || || |||||||| | || || |||||||| || || || Sbjct 133675 TCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAG 133616 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | | |||||| ||| ||||| ||| | | Sbjct 133615 ATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTTGCCTTCACATTG 133556 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || ||| ||||| |||| |||||||| || || |||| || || ||| Sbjct 133555 TCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACA 133496 Query 46583 AAGATTTGCATTTTGCACAAACAACACGCCGAATACGATGCA 46624 ||||| |||| || ||| | || ||| ||| | |||||| Sbjct 133495 AAGATCTGCA--TTCCACCACGAAGACGAAGAACAAGATGCA 133456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565224615248520