Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq35 203 3e-47 seq482 199 4e-46 seq1072 100 3e-16 >seq35 Length=211330 Score = 203 bits (224), Expect = 3e-47 Identities = 383/556 (69%), Gaps = 17/556 (3%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| || |||||| ||||| ||||| || | ||||| ||||| ||| | ||| Sbjct 160117 GCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAA 160058 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 ||| ||||| | || || || || | |||||| |||| ||||| ||| || ||||| Sbjct 160057 GCCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAA 159998 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA---CGTGGCTTCTTTGCT 133070 | ||| || || || || || || || || ||||||||||| || | ||| | || Sbjct 159997 AATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGTTCGTCACT 159938 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||||||||| ||||| |||||||| |||| ||| || || || ||||| || Sbjct 159937 G---ATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGC 159881 Query 133131 GTTCAACAAACGGAGTTTCTCTTCCGA--GGAACGC--ACGTAGGTGTCGATGAGGGTCG 133186 | ||| || ||| | | | | ||| || | | ||| ||||||||||| | Sbjct 159880 AT-CAAAAA--GGAAAT-CACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAG 159825 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 | || | || ||||| | ||||||||| || || || ||||| ||||| ||||||| Sbjct 159824 AGTAAGTCTCGGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGCGCCT 159765 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | | ||||| ||||| | | ||| || |||| ||||| |||||||| ||||| || Sbjct 159764 CAGCGACCTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTGACAATGCCATCAG 159705 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-- 133364 |||||| || || || || || | |||||| || ||| |||| |||| ||| Sbjct 159704 AGGCGGCAAAGAACGCGAGGACACGGGAGATGAAGAATCGTTCGCTGTCATTCAGGCGGT 159645 Query 133365 -CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 | |||||| | ||| || || | |||| ||| || | ||||| || || |||| Sbjct 159644 TGTTCCAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCT 159585 Query 133424 CGGCTTTTTTGTACAT 133439 |||| || |||||||| Sbjct 159584 CGGCCTTCTTGTACAT 159569 >seq482 Length=177074 Score = 199 bits (220), Expect = 4e-46 Identities = 380/552 (69%), Gaps = 11/552 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA--AGTCA 132952 || || || ||| ||| || || || || | | ||||| ||||| |||| ||| | Sbjct 124117 CACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTT--TGAATAAGTTA 124174 Query 132953 AGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGA 133012 ||| ||||| |||||||| || || | ||| || |||| ||||| || ||||| | Sbjct 124175 GGCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAA 124234 Query 133013 AGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC-TTTGCTG 133071 ||| |||||||| || ||||| ||||||| | ||| | || ||| |||| |||| Sbjct 124235 AGATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTG-CTTCGTTTGTCA 124293 Query 133072 GCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCG 133131 | ||||| || ||||| ||||| || |||| |||||| || ||||| || ||| Sbjct 124294 GATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCG 124353 Query 133132 TTCAACAAACG-GAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATA 133190 | || | | | | | || || | ||||| || ||||| || || || Sbjct 124354 TCGAAGAGATATGCGCGTTGATTAAGATCCTTG-ACGTATGTATCGATAAGCAGAGAGTA 124412 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 |||| || || ||||| ||||| ||||| || || |||||| | |||||||| | Sbjct 124413 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 124472 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | |||||||| | | || ||||| | |||||||||||| ||||| ||||| ||| Sbjct 124473 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 124532 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC--- 133367 ||| || || || || ||||| |||||||||| ||||||| | ||| || ||||| Sbjct 124533 GGCAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGTT 124592 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| || | | ||||| | ||| || |||||| ||||| || || || Sbjct 124593 CCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTGC 124652 Query 133428 TTTTTTGTACAT 133439 ||| |||||||| Sbjct 124653 TTTCTTGTACAT 124664 >seq1072 Length=303801 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || |||||||||||||| ||||| | || |||||| | | Sbjct 211488 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 211429 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || ||||| ||||| |||| || Sbjct 211428 GACACGATCGACAACG-TGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 211370 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 211369 ACAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAA 211310 Query 38423 CATCCAAAAGGA 38434 ||| || ||||| Sbjct 211309 CATTCAGAAGGA 211298 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || || || | || || ||| | | Sbjct 211032 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCG 210973 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 210972 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 210913 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || ||||| ||| |||| || | ||||| || ||| |||||| Sbjct 210912 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 210853 Query 38424 ATCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 ||||| ||||| |||| || || |||||| Sbjct 210852 ATCCAGAAGGAGTCGACTCTTCACCTTGGTG 210822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160602035840