Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq641 122 3e-22 seq250 102 3e-16 seq186 93.3 2e-13 seq102 91.5 6e-13 seq1072 89.7 2e-12 seq31 84.2 9e-11 >seq641 Length=219978 Score = 122 bits (134), Expect = 3e-22 Identities = 247/364 (68%), Gaps = 7/364 (2%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||||||||| || || ||||| || |||||||||||||| || ||| || | Sbjct 65473 CCTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACTGCCGAAGCATTCCTC 65414 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | | | || | |||| | || |||||||| ||||||||||| | ||||| Sbjct 65413 GGCACCACTATCACCAACTCAGTCGTGACCGTTCCCGCGTATTTCAATGACTCTCAACGT 65354 Query 451364 CAAGCAACTAAAGATGCAGGA--CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 || ||||| || || || ||| ||||| | || | ||||| || || |||||||| | Sbjct 65353 CAGGCAACCAAGGACGCCGGAACCATAT--CCGGAATGAATGTCCTCCGTATTATTAACG 65296 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || || || | || ||||| || | || ||| | | | || | Sbjct 65295 AACCAACTGCCGCGGCGATTGCTTATGGCCTCGACAA---AAAGGTGTCTGGCGAGCGTA 65239 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 || | || | || ||||| || ||||||||| |||| ||| || | | || |||| Sbjct 65238 ATGTCTTGATTTTCGATTTGGGAGGAGGAACTTTTGATGTTTCCCTATTGACGATCGAAG 65179 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 | || | || ||||| || || || |||||| || ||||| || ||||| || ||| Sbjct 65178 AAGGTATTTTCGAAGTCAAAGCCACTGCTGGTGACACCCATCTTGGCGGTGAGGACTTTG 65119 Query 451602 ATAA 451605 | || Sbjct 65118 ACAA 65115 >seq250 Length=164446 Score = 102 bits (112), Expect = 3e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||| || || || || || | || || || || || Sbjct 133484 AATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTC 133543 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || ||| ||||| |||||||| || || |||||||| || Sbjct 133544 TGATACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 133603 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||| | || || | || || || || |||||||| | ||| | |||||||||| Sbjct 133604 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 133663 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | || || | || ||||| Sbjct 133664 TATCCAAAAAGAATCGACTCTTCA 133687 >seq186 Length=69704 Score = 93.3 bits (102), Expect = 2e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || || || |||||||| || ||||| ||||| || ||||| || Sbjct 31357 GCTGTTATCACGGTCCCTGCCTACTTCAATGACGCCCAACGTCAAGCCACGAAAGACGCT 31298 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || ||||||||| | |||||||||| | || ||||||||||| || || || | Sbjct 31297 GGTCAGATTGCTGGTCTTGATGTTCTTCGTGTCATCAATGAACCTACGGCTGCCGCATTG 31238 Query 451442 GCATATGGACT 451452 || ||||| || Sbjct 31237 GCCTATGGTCT 31227 >seq102 Length=127478 Score = 91.5 bits (100), Expect = 6e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 391155 ATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 ||||||||||||||||||||||| || ||| | || || ||||| ||||||||| ||||| Sbjct 68331 ATTCCTCCTGATCAACAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACT 68390 Query 391215 TTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 | | || ||||| ||| | ||||| | || || ||||| ||| Sbjct 68391 CTTTCCGACTATAACATTCAGAAGGAATCGACGCTCCACTTGGTA 68435 >seq1072 Length=303801 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || || || ||||| || ||| | || || || || || Sbjct 211488 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 211429 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || || |||||||| || |||||||| |||||| Sbjct 211428 GACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAA 211369 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| |||| ||| | || || || || ||||||||| | || | | || || || Sbjct 211368 CAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAAC 211309 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| |||| |||||| Sbjct 211308 ATTCAGAAGGAGTCAACCCTTCAC 211285 >seq31 Length=238504 Score = 84.2 bits (92), Expect = 9e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 391153 GAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA 391212 ||||||| ||||||||||| || | |||||| | || ||||||||||| |||||| | | Sbjct 175987 GAATTCCCCCTGATCAACAGCGACTCATTTTCGCCGGAAAACAACTTGAGGATGGACGTA 176046 Query 391213 CTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 || || ||||| || ||| | || || | || ||||||||||| Sbjct 176047 CTCTGAGTGATTACAACATTCAGAAAGAATCCACCCTTCACTTAGT 176092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975669012596708