Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq641 221 2e-52 seq1039 132 6e-26 seq338 104 3e-17 seq109 100 4e-16 seq344 84.2 3e-11 >seq641 Length=219978 Score = 221 bits (244), Expect = 2e-52 Identities = 542/817 (66%), Gaps = 6/817 (1%) Strand=Plus/Plus Query 6579 CTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCT 6638 |||| || || ||||| ||| ||||| |||||| ||||| |||| | | |||| Sbjct 64185 CTTTGTATTTCTCCGCCTCTGAAACCATGCGTTCAATCTCTTCCTTCGTAAGACGGCCCT 64244 Query 6639 TATCATTCGTAAT--CGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTAC 6696 | ||||| || || || | ||| || || || | |||||| | ||| || Sbjct 64245 TGTCATTGGTGATGACGATACGGTTT--GACTTGCCGGTACTCTTATCAGCGGCAGAAAC 64302 Query 6697 ATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGG 6756 |||||| ||||| || ||||| | ||||| | || | ||||| ||| ||| | || Sbjct 64303 ATTCAAGATACCGTTGGCATCGATGTCGAAGGTGACCTCGATTTGAGGTACACCACGGGG 64362 Query 6757 TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTT 6816 || | ||| ||||| | | || ||| | ||||| | |||| ||| | | Sbjct 64363 AGCAGGTGGGATACCAGAAAGCTCGAATTTCCCAAGGAGGTTGTTGTCCTTAGTGCGAGC 64422 Query 6817 ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAA 6876 ||||||||| || |||||| || ||| ||||||| ||||| |||||||| Sbjct 64423 ACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTTATCGGCGTAAGTTGAGAA 64482 Query 6877 GATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACC 6936 | ||| ||||||| || | || || || | | || | | |||||| | ||| Sbjct 64483 GGTTTCAGACTTCTTAGTCGGGACAGTGGTGTTACGCTTGATGAGTGCGGTCATCACACC 64542 Query 6937 ACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAAC 6996 ||| |||||| | || || || || || | ||||| | ||| | || || ||| Sbjct 64543 ACCAGCAGTTTCAATACCGAGGGAGAGGGGAGAGACGTCGAGGAGAAGTAGATCCTGAGT 64602 Query 6997 AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 || ||||| | || || || |||||||| | || ||||| || || || Sbjct 64603 CTTCTCAGAAGTGTCACCGGATAGAATCGCAGCTTGGACAGCAGCACCGTAGGCAACAGC 64662 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACA-TTT 7115 ||||||||||||||| | || || | || ||||| ||||| | || || | | || Sbjct 64663 CTCATCGGGGTTAATGCTCTTGTTGGGCTCCTTACCATTAAAGAAGTCGGAGACGAGCTT 64722 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 | | || || || || || || || ||||| | |||||||| | ||| || | | Sbjct 64723 GACG-ATACGAGGAATACGAGTTGAACCGCCGACAAGGACGATTTCGTGCACATTGGCCT 64781 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 |||| ||||| || || ||||| || |||||||| || | | ||||||| | || Sbjct 64782 TATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGAGAGTGCTACGGAAAAGGT 64841 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | || |||||||| ||||| ||||| |||| ||| || ||||| |||| || || | Sbjct 64842 CTTGGCAGAGTTCCTCGAAACGGGCACGTGTAAGGGAAGTGTAGAAGTCAATACCCTCAT 64901 Query 7296 ATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCT 7355 | || ||||| ||||| || | || || || | ||||| || || ||||| || || | Sbjct 64902 ACAAGGAATCGATTTCGATCGAGGTCTGAGCGGCAGAAGACAAAGTACGCTTGGCACGTT 64961 Query 7356 CACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 | || || || || | |||||||| |||||| ||||| Sbjct 64962 CGCAAGCGGTACGGAGACGACGAACGGCACGAGGGTT 64998 Score = 158 bits (174), Expect = 2e-33 Identities = 276/395 (70%), Gaps = 10/395 (3%) Strand=Plus/Minus Query 7333 AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 ||||| || | ||| || |||||||| || ||| || ||| | || ||||| | | Sbjct 179189 AGATAGTGTCCTCTTGGCACGCTCACAAGCACTTCTTAGACGTCTGAGAGCACGGGCATC 179130 Query 7393 ACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT-CGAAG-GAGT 7450 | |||| || || ||| || ||||| ||||| | ||||||| | ||| | || Sbjct 179129 ATCGGAGATGTCGAGCTTTGACTTGCGTTTGAACTCGTTCTTGAAGTGTTCCAAGAGGGT 179070 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 | | || || || ||||||||||| || || || || || ||||| ||||| | ||| Sbjct 179069 GTTG--TCAAAGTCCTCACCACCCAAATGAGTGTCACCAGCAGTCGCCTTGACAGCGAAG 179012 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 | ||| || || || || | |||||||| || || ||||| |||| || |||||| Sbjct 179011 ACACCACCGCTGATATTCAAAAGGGAAACATCGAAAGTTCCACCTCCCAAATCGAAAATG 178952 Query 7571 AGTACGTTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCC 7627 || |||||| | || || |||| | | | ||||||||||| || ||||| || || Sbjct 178951 AGGACGTTCTTTTC--AGTTTTTGAT-TGACGGTCGAGACCGTAAGCAATAGCGGCAGCA 178895 Query 7628 GTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTC 7687 ||||| ||||| || ||||| ||| | |||||||| |||| | || ||||| || Sbjct 178894 GTTGGCTCATTGATGATACGGAGAACATCGAGGCCAGCGATAGCACCAGCGTCTTTTGTT 178835 Query 7688 GCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || || ||||| ||||||||||| || || Sbjct 178834 GCCAAACGCTGGGAATCATTAAAGTAGGCAGGTAC 178800 Score = 149 bits (164), Expect = 8e-31 Identities = 248/356 (70%), Gaps = 2/356 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || ||||| || | || || || || || || ||||||||||| || |||||| Sbjct 65118 TCAAAGTCCTCACCGCCAAGATGGGTGTCACCAGCAGTGGCTTTGACTTCGAAAATACCT 65177 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | || | ||||||||||| || || || |||| || ||||| | || Sbjct 65178 TCTTCGATCGTCAATAGGGAAACATCAAAAGTTCCTCCTCCCAAATCGAAAATCAAGACA 65237 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || || ||||| || || || || ||||| || |||||||| Sbjct 65238 TTACGCTCGCCAGACACCTTTTTGTCGAGGCCATAAGCAATCGCCGCGGCAGTTGGTTCG 65297 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||||||||| || |||| |||| || | || ||| | || || || || || || || Sbjct 65298 TTAATAATACGGAGGACA-TTCATTCCGGATATGGTTCCGGCGTCCTTGGTTGCCTGACG 65356 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || || || || || || || || || ||||| | || |||| | | ||||| Sbjct 65357 TTGAGAGTCATTGAAATACGCGGGAACGGTCACGACTGAGTTGGTGATAGTGGTGCCGAG 65416 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | | ||| || | |||||||||||| || |||||||| || || ||||||| Sbjct 65417 GAATGCTTCGGCAGTTTCTTTCATTTTGAGGAGGACCATCGAAGATATTTCTTCAG 65472 Score = 109 bits (120), Expect = 7e-19 Identities = 111/144 (77%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 7973 GGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTA 8032 |||||||| || ||||||||| || || || ||||||||||| || | | || Sbjct 65742 GGGTTCATCGCGACTTGGTTCTTTGCGGCATCACCGATAAGACGCTCTCCGT---CGGTG 65798 Query 8033 AACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGG 8092 || ||||| || || || |||||||| || |||||||| || ||||||||||| || || Sbjct 65799 AAGGCGACATAGGAAGGCGTCGTTCGGTTACCTTGGTCATTGGCAATAATTTCAACTCGA 65858 Query 8093 TCGTTTTGCCAGACGCCGACGCAC 8116 ||||||||||| || ||||| ||| Sbjct 65859 TCGTTTTGCCACACACCGACACAC 65882 >seq1039 Length=11967 Score = 132 bits (146), Expect = 6e-26 Identities = 458/712 (64%), Gaps = 12/712 (2%) Strand=Plus/Minus Query 6679 CTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAAT 6738 |||||| ||||| |||| | |||||| || ||||| | || || | || | ||| Sbjct 2994 CTTATCAGCAGCAAAAACATCCGAAATACTGTTGGCATCGATGTCAAAGGTGACCTCAAT 2935 Query 6739 TTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACT 6798 ||| | || ||| || || | ||| ||||| | ||||| | ||||| | | Sbjct 2934 TTGAGATGCACCATGGGGAGCAGGTGGGATACCAGAAGGCTCAAACTTCCCAAGGAGGTT 2875 Query 6799 GTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATT 6858 ||| ||| | | ||||||||| | |||||| || ||| ||| ||| || Sbjct 2874 GTTGTCCTTAGTGCAAGCACGTTCACCCTTGAAGACTTGGATGAGCACATCAGATTGGTT 2815 Query 6859 ATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAAT 6918 || ||||||||| ||| ||||| | || | || || || | | || Sbjct 2814 GTCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTGGTCGGGACAGTGGTGTTACGCTTGAT 2755 Query 6919 AACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAA 6978 | | |||||| | |||||| |||||| | || ||||| || || | |||| | Sbjct 2754 GAGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGTCGTCGAG 2695 Query 6979 GAGTAACAGGTCTTGAA----CAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGA 7034 ||| | || || ||| |||| || |||| | ||| || || ||||||| Sbjct 2694 GAGAAGTAGATCCTGAGTCTTCAGAAGTGT------CACCGGATAAAATCGCAGCTTGGA 2641 Query 7035 CCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGT 7094 | | || ||||| || || ||||| || ||||| || | || || | || ||||| | Sbjct 2640 CAGCAGCACCGTAGGCAACAGCCTCGTCAGGGTTGATGCTCTTGTTGGGCTCCTTACCAT 2581 Query 7095 TAAAATAATCCGATAACAT-TTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAA 7153 |||| | || || | | ||| || | || || || || || | ||||| Sbjct 2580 TAAAGAAGTCGGAGACGAGCTTGACGA-TACGAGGAATACGAGTTGAACTGCCGACAGGG 2522 Query 7154 ACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGT 7213 || ||||| | ||| || | ||||| ||||| || || ||||| || |||||||| Sbjct 2521 ACAATTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGA 2462 Query 7214 TCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGAT 7273 || | | ||| ||| | |||| || ||||||||||||| ||| | |||| ||| Sbjct 2461 TCGAGAGTGCTACAGAAAAGGTCCTGGCAGAGTTCCTCAAAACAGGCATGTGTAAGGGAA 2402 Query 7274 GTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA 7333 || ||||| |||| || | || || ||||| ||||| || | || || | | ||| Sbjct 2401 GTGTAGAAGTCAATACCCTTATACAAGGAATCGATTTCGATCGAGGTCTGAGTGGCAGAA 2342 Query 7334 GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCAC 7385 || || || ||||| || || || || || || || |||||||| ||||| Sbjct 2341 GAAAAAGTACGCTTGGCACGTTCGCAAGCAGTACGGGGACGACGAACGGCAC 2290 Score = 122 bits (134), Expect = 1e-22 Identities = 236/348 (68%), Gaps = 3/348 (1%) Strand=Plus/Minus Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 ||||||| | || || || || | || |||| |||||| ||||||||| ||| || Sbjct 2275 CACCACCAACATGGGTGTCACCAACAGTGGCTTCGACTTCGAAGATACCTTCTTTGATTG 2216 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT 7586 | || | ||||||||||| || || || ||||| || ||||| | || || |||| Sbjct 2215 TCAATAGGGAAACATCAAAAGTTCCTCCTCCCAGATCGAAAATTAAGACCTTGCACTCGT 2156 Query 7587 CGTCTTTGTTCTTATCGAGA---CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | ||||| || ||| || || || || ||||| | ||||||| ||||| | Sbjct 2155 CAGACACCTTCTTGTCAAGAAGGCCATAAGCAATCGCCGCAGGGATTGGTTCGTTAATGA 2096 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 |||| || | |||| || | | ||| | || || || || | || ||||| || | Sbjct 2095 TACGGAGGCCATTCATTCCGGATTTGGTTCCGGCGTCCTTGGTTGTCTGACGTTGAGAGT 2036 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 ||| ||||| || || || || |||||| || |||| | | ||||| | | || Sbjct 2035 TGTTGAAGTACGCGGGAACGGTCGCGACCGAGTTGGTGATAGTGGTGCCGAGGAATGCTT 1976 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || | | |||||||||| || |||||||| || || ||||||| Sbjct 1975 CGGCAGTTTTTTTCATTTTGAGGAGGACCATCGAAGATATTTCTTCAG 1928 >seq338 Length=27447 Score = 104 bits (114), Expect = 3e-17 Identities = 174/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 105835 AACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATA 105894 || || || || ||||| | || || || ||||| | ||| | ||||| |||||| Sbjct 3319 AATCCGATGCCGCCAGCTGATTTGCTAATCAAAGCACAATTTTTCAGCGTATCATAAATA 3378 Query 105895 CCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGT 105954 || ||||| || ||||| | | |||| ||| || || |||||||| | | | Sbjct 3379 CCATCGATGGAGTCGTCCTTCATGGACATCAAGAAGCAAGACGACATTTGAGCTGAAGTG 3438 Query 105955 GTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCG 106014 || || |||||||| || |||||||| ||||||||||| || | ||||| | | Sbjct 3439 GTCCCGGCATTGAAAAGGGTTGGTGTCGCATGAATGAAGAATCGGTTCGACATTAGATTA 3498 Query 106015 TATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAG 106074 || || | || || | |||||||| | |||||| || |||||||| || ||||| | Sbjct 3499 TAGGTCTGTAGAACACGTTCAATATCATCTCCATGTATTCCAATAGCCACACGCATGAAC 3558 Query 106075 AGATATTGGGGT 106086 | || ||| ||| Sbjct 3559 ATATGTTGCGGT 3570 >seq109 Length=35798 Score = 100 bits (110), Expect = 4e-16 Identities = 170/243 (70%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 115351 GCAAATTCTTGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCT 115410 |||||||| ||||| |||||||| | || ||||||||||| ||| ||||| Sbjct 2884 GCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAATGTCAAACCC 2943 Query 115411 GGAAGTAACCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTAC-CCGAGAAGAATAT 115469 || | || |||| || || | |||||| || ||| |||| || | ||||| || || Sbjct 2944 GGCATCAATCCTCGTTTCTTCATCCAAAATAT-GCAGGCAAACGACGCAGAGAAAAAAAT 3002 Query 115470 ACCTTCAACACACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTATC---AAA 115526 ||||| | ||||| |||| ||||| || ||||| | ||| ||||| || Sbjct 3003 GCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTATTATCTTGAAT 3062 Query 115527 CCACTTCATAGCCCATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAA 115586 ||||| | |||||||| || ||||| | ||| |||||||| |||| ||| | | ||| Sbjct 3063 CCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAATAGAGTTGAA 3122 Query 115587 TAA 115589 ||| Sbjct 3123 TAA 3125 >seq344 Length=30398 Score = 84.2 bits (92), Expect = 3e-11 Identities = 164/237 (69%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 105838 CCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCG 105897 || ||||| ||||| ||||| || || || | ||| | || ||| | || || Sbjct 11608 CCTATACCACCAGCTGTTTTACTAATCAAGGCGCAGTTTTTCAACGTCTCGAATATTCCT 11549 Query 105898 TCGATACTATCTTCCTTATTCGCA-ATCAGGAAACACGATGACATTTGTGGTCTGGGTGT 105956 || ||| |||||| || | ||| | || ||||||||||||||||| || || || Sbjct 11548 TCAATAGAATCTTCTTTCAT-GCAGACCAAAAAACACGATGACATTTGGGGCGAAGGAGT 11490 Query 105957 ACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCG---ATAACGCTTC 106013 ||| ||| |||| || || || ||||||||| |||| | | | ||| |||| | | Sbjct 11489 ACCTGCACTGAAAAGCGTCGGAGTTGCATGAGTGAA-ATATCGCTCGGACATAAGG--TT 11433 Query 106014 GTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCAT 106070 ||| || | || || || |||||||| | |||||| || || | ||| || ||||| Sbjct 11432 GTACGTCTGCAACACATGCTCAATATCATCTCCATGTATTCCGACAGCAACACGCAT 11376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635117310698840