Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq51 131 2e-25 seq35 87.8 2e-12 >seq51 Length=295103 Score = 131 bits (144), Expect = 2e-25 Identities = 319/477 (67%), Gaps = 10/477 (2%) Strand=Plus/Plus Query 112506 AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAAT 112565 |||||||| || ||||||||||| ||| | ||||| || | || |||||| | || Sbjct 221242 AAACTCCATGATGTTACGAAAACGGTCGCTTTCAACCTCAATCGCGTCATTGATCGCAAC 221301 Query 112566 TTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 112622 | |||||| | |||| || ||| |||||| ||| | ||||||| ||||| || Sbjct 221302 TACTACCCCATCCCTGAG---GCCCGTCGATCTAACATGCGTAACCGTCCCATTGGAATC 221358 Query 112623 GGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGA 112681 ||||| ||||||||||| || | ||||| | ||| | | | ||||| || ||| Sbjct 221359 GGTGTTCAAGGTCTCGCTGACGCCTTCATGGCATTGAAGATGC-CTTTTGACTCGCCCGA 221417 Query 112682 AGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAG 112741 ||| |||||| |||| || || || |||||||| || || | |||| ||||||||| Sbjct 221418 AGCCAAGGAACTCAACACGAAGATTTTCGAGACAATTTACCATGGCGCTTGTGAGGCGAG 221477 Query 112742 TTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 112801 || || |||| || ||||||||||| || || | |||| ||| ||| || Sbjct 221478 TTGCGAAATGGCGAAGACGGATGGTCCATACGAGACGTGGATGGGTAGTCCTGCTCAGCA 221537 Query 112802 AGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACG 112860 |||| | || || ||| | |||| || | ||| | | || || |||||| | Sbjct 221538 AGGGCAATTGCAGTTCGATCTATGGG-GTGTTACACCTACCGATCTCTGGGACTGGAATA 221596 Query 112861 CTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGC 112920 | | ||||| |||| || | || | | ||| || | | |||||||||| Sbjct 221597 CGTTGAAGGAGAGCATTTCTAAGTATGGAATGAGGAACTCGCTGCTTACTGCACCAATGC 221656 Query 112921 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 112977 | || ||||| || || || | || || ||||||||||| || ||||||| Sbjct 221657 CTACTGCCTCTACAAGTCAGATGCTCGGCTTCAACGAATGCTTTGAGCCTTACACGA 221713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| | ||| ||||||||||||| | || || || || || |||||||| ||| Sbjct 220175 CCACAACATATGATCATGCGGGTCGCTGTTGGGATACACGGAGACGATATTGAGCATGTC 220234 Query 111672 TTGGAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 ||| | |||||| || |||||| | | ||| |||| || || || || || ||||| Sbjct 220235 TTGCAAACATACAACCTCATGTCCGAGCGATAT-TTCACTCATGCCACTCCCACTCTCTT 220293 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || ||||| || || ||||||||| || |||||| || | || || || Sbjct 220294 CAATGCCGGTACCCCTTCGCCTCAAATGTCCTCATGCTTCCTTGTTTGCATGAAAGATGA 220353 Query 111791 TTCAATCAATGGCATTTACG 111810 ||| ||| | || || |||| Sbjct 220354 TTCTATCGAAGGTATCTACG 220373 Score = 84.2 bits (92), Expect = 3e-11 Identities = 156/227 (69%), Gaps = 9/227 (4%) Strand=Plus/Plus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || ||||| | || |||||||| | ||||||||||| | | || || || || Sbjct 220525 GGCACGAATGGGTACTCGAATGGTATTGTGCCAATGCTTCGGGCGTACAATGCTACTGCA 220584 Query 111963 CGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 || ||||| |||||| ||| ||||| | ||| || |||| ||||||| || Sbjct 220585 CGATATGTCGACCAAGGTGGTAACAAGCGTC-CTGGGG--CTTTCGCTATCTATCTCGAA 220641 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || ||||| || |||||| | | | | | || ||| | || || || | ||||| Sbjct 220642 CCTTGGCATGCTGATATCTTCGCGATGATCGATTTGAGGAAGAATCATGGCAAAGAGGAA 220701 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 112123 | ||| ||| ||| | |||| ||||| |||||||| |||||||| Sbjct 220702 GTGCGCGCCCGTGATTTATTCTATGCTCTATGGATTCCGGATCTCTT 220748 >seq35 Length=211330 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| ||| | || ||||| |||||| || || ||||||||||| |||||| ||| | Sbjct 159962 GAGCGTCTCGTAGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTC-GCGTC 160020 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC-TTCTCCAACGAGCTTA 102297 || | |||| | |||||||| || | ||||| || || || ||||| |||||||| | Sbjct 160021 CATCTTTTGGATGAAGAAGCGTGGATTAATGCCTGG-CTTGGCGTTCTCAAACGAGCTCA 160079 Query 102298 TCTCTCGTGACGAGGG 102313 || |||||| ||||| Sbjct 160080 TCAGTCGTGATGAGGG 160095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620727261644720