Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq338 93.3 5e-14 seq51 86.0 7e-12 >seq338 Length=27447 Score = 93.3 bits (102), Expect = 5e-14 Identities = 186/274 (68%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 || |||| || || ||| || || || || || || | || ||||| ||||| Sbjct 3298 GCTCGAACGTTATGTATACTCAATCCGATGCCGCCAGCTGATTTGCTAATCAAAGCACAA 3357 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | | | || ||| ||||||||||||| || || || |||| ||| || | |||||| Sbjct 3358 TTTTTCAGCGTATCATAAATACCATCGATGGAGTCGTCCTTCATGGACATCAAGAAGCAA 3417 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || ||||| |||| || || || |||||||| || || ||||||||||||||||| Sbjct 3418 GACGACATTTGAGCTGAAGTGGTCCCGGCATTGAAAAGGGTTGGTGTCGCATGAATGAAG 3477 Query 111043 AGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAA 111100 | | | ||||| || || || | || | | | | | ||| | || || | Sbjct 3478 AATCGGTTCGACATTAGATTATAGGTCTGTAGAAC--ACGTTCAATATCATCTCCATGTA 3535 Query 111101 TACCAATGGCAACTCGCATGAACATATATTGAGG 111134 | ||||| || || ||||||||||||| ||| || Sbjct 3536 TTCCAATAGCCACACGCATGAACATATGTTGCGG 3569 >seq51 Length=295103 Score = 86.0 bits (94), Expect = 7e-12 Identities = 190/281 (68%), Gaps = 12/281 (4%) Strand=Plus/Minus Query 110861 TGGCACGAATGTCGTGGATATGC--ATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 |||| || |||| || ||||| || || || ||||| || | || || || || Sbjct 220448 TGGCCCGGATGTTATG--TATGCTAATTCCTATGCCACCGGCTGATTTGCTGATCAAAGC 220391 Query 110919 ACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAA 110978 ||| | | | || ||| | || ||||| || || ||||| | || || || || || Sbjct 220390 ACAGTTTTTCAGGGTATCGTAGATACCTTCGATAGAATCATCTTTCATGCAAACAAGGAA 220331 Query 110979 GCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAAT 111038 ||| || ||||| ||||| ||| || || ||||||||||| || || || |||||| | Sbjct 220330 GCATGAGGACATTTGAGGCGAAGGGGTACCGGCATTGAAGAGAGTGGGAGTGGCATGAGT 220271 Query 111039 GAACAGACCTTGGGACATCTTGTTGTATGTGT-CGAG---TGCGGAGGGTACATCTTTAC 111094 ||| | | |||||| ||||||||| | | || ||| | | ||| | | Sbjct 220270 GAAATATCGCTCGGACATGAGGTTGTATGTTTGCAAGACATGCTCA----ATATCGTCTC 220215 Query 111095 CGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGC 111135 |||| || |||| || || ||||||| ||||| ||| ||| Sbjct 220214 CGTGTATCCCAACAGCGACCCGCATGATCATATGTTGTGGC 220174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961636347800