Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq338 91.5 2e-13 seq51 89.7 6e-13 >seq338 Length=27447 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171 |||| ||||| | ||| ||||| ||||| ||| || | ||||||| ||||| || | Sbjct 3371 CATAAATACCATCGATGGAGTCGTCCTTCATGGACATCAAGAAGCAAGACGACATTTGAG 3430 Query 107172 GTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACA 107231 | | || || |||||||| ||||||||||| || |||||||| | | | |||| Sbjct 3431 CTGAAGTGGTCCCGGCATTGAAAAGGGTTGGTGTCGCATGAATGAAGAATCGGTTCGACA 3490 Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291 | | || |||| | ||| ||||| || || || || || || || ||||||| Sbjct 3491 TTAGATTATAGGTCTGTAGAACACGTTCAATATCATCTCCATGTATTCCAATAGCCACAC 3550 Query 107292 GCATAAACATGTATTGGGGT 107311 |||| ||||| | ||| ||| Sbjct 3551 GCATGAACATATGTTGCGGT 3570 >seq51 Length=295103 Score = 89.7 bits (98), Expect = 6e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 |||||||| | ||| || || || || || | ||||||||| |||||| || || Sbjct 220371 TAGATACCTTCGATAGAATCATCTTTCATGCAAACAAGGAAGCATGAGGACATTTGAGGC 220312 Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGGACAT 107232 || ||||| ||||||||||| || || || || ||| |||| ||| | | |||||| Sbjct 220311 GAAGGGGTACCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAA-ATATCGCTCGGACAT 220253 Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292 || |||||| | ||||||| ||||| || || ||||| || || | || || || Sbjct 220252 GAGGTTGTATGTTTGCAAGACATGCTCAATATCGTCTCCGTGTATCCCAACAGCGACCCG 220193 Query 107293 CATAAACATGTATTGGGG 107310 ||| | ||| | ||| || Sbjct 220192 CATGATCATATGTTGTGG 220175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966411843240