Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq250 168 1e-36 seq1072 147 5e-30 seq102 89.7 1e-12 >seq250 Length=164446 Score = 168 bits (186), Expect = 1e-36 Identities = 164/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| |||||||| || |||||||| ||||| ||||| | |||||| | |||||||| Sbjct 133694 AACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTC 133635 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || |||||||| ||||||||||| ||||| || || || || || || Sbjct 133634 TAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTG 133575 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| ||| ||| || || |||||||| || || ||||| || | ||| | ||||| Sbjct 133574 AATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTCTT 133515 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| |||||||| || || || | |||||| Sbjct 133514 TCCGGTCAAAGTCTTGACAAAGATCTGCATT 133484 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| ||||| || |||||||| ||||| || || || | ||| || | ||||| || | Sbjct 133920 CAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCA 133861 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| || || ||||| | || |||||||| |||||||||||||||||||| |||| Sbjct 133860 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAA 133801 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | ||| |||||| || || || ||||| ||| || || ||||| || | |||||||| Sbjct 133800 TCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTC 133741 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || || || | ||||| Sbjct 133740 CGGTCAATGTCTTCACAAAGATCTGCAT 133713 >seq1072 Length=303801 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || |||||||| |||||||||||||| | ||| || | ||||| || Sbjct 211052 ACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCC 211111 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || || || || || ||||||||||| || ||||| ||||| ||||| || Sbjct 211112 AACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGG 211171 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| || || ||||| ||||| || || || ||||| || | ||||||| Sbjct 211172 ATTTTCGCCTTAACATTGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCTTT 211231 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 211232 CCCGTGAGTGTCTTGACGAAGATCTGCAT 211260 Score = 145 bits (160), Expect = 2e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||| ||||| || || || |||||||||| ||| || | ||||| || | Sbjct 210825 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCA 210884 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| || || || || || || || ||||| || |||||||| || ||||| || | Sbjct 210885 ACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGA 210944 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| || || |||||||||||||| || || || || |||| |||||||| Sbjct 210945 TCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTC 211004 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| | || || ||||| | ||||| Sbjct 211005 CTGTGAGGGTCTTGACGAAGATCTGCAT 211032 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| || ||||| || ||||| ||||| || | ||| || | |||||||| Sbjct 211279 AACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTC 211338 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| ||||||||||| || ||||||||||| || || || || Sbjct 211339 GAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTG 211398 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| ||||| || || ||||| ||| || || || | || | ||| || Sbjct 211399 TATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTT 211458 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 211459 GCCCGTGAGGGTCTTAACAAAGATTTGCAT 211488 Score = 105 bits (116), Expect = 1e-17 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||||||||| || |||||||| | ||||||| || || || Sbjct 211794 ACTAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATCCGAGAGAGTTCGTCCGTCCTCA 211853 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 || ||||| || ||||| || || |||||||||||||||||||||| Sbjct 211854 AGTTGCTTTCCAGCGAAAATCAGACGTTGTTGGTCTGGAGGAATGC 211899 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || ||||| ||||| |||| ||| |||| ||||||||| Sbjct 211508 ACAAGGTGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGACCATCTTCG 211567 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || || || ||||| ||||||||||| || || || Sbjct 211568 AGCTGCTTCCCCGCAAATATAAGACGTTGTTGGTCAGGTGGGAT 211611 >seq102 Length=127478 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || || || || ||||| || || |||| |||||||| ||||||||||| || Sbjct 68429 GTGGAGCGTCGATTCCTTCTGAATGTTATAGTCGGAAAGAGTTCGTCCATCTTCGAGTTG 68370 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||| || |||||||| | |||||||| || |||||||| Sbjct 68369 CTTTCCGGCGAAGATCAAACGTTGTTGATCAGGAGGAAT 68331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109453866080417