Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq641 161 8e-34 seq186 122 7e-22 seq250 100 2e-15 seq31 91.5 1e-12 >seq641 Length=219978 Score = 161 bits (178), Expect = 8e-34 Identities = 460/702 (66%), Gaps = 4/702 (1%) Strand=Plus/Minus Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 |||||||||| | || ||||||||| | ||||| || || | || |||| |||| | Sbjct 64985 TTCGTCGTCTCCGTACCGCTTGCGAACGTGCCAAGCGTACTTTGTCTTCTGCCGCTCAGA 64926 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGG 552018 || | || ||| | ||||| || | |||||| ||||| | | || | || | | | Sbjct 64925 CCTCGATCGAAATCGATTCCTTGTATGAGGGTATTGACTTCTACACTTCCCTTACACGTG 64866 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 || || || || | || || || || | | || | || || || || | | Sbjct 64865 CCCGTTTCGAGGAACTCTGCCAAGACCTTTTCCGTAGCACTCTCGATCCTGTCGAGAAGG 64806 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 | | | ||||| ||||||||||| |||| || || ||||| || ||||| || || | Sbjct 64805 TCCTTCGCGATTCCAAGATTGATAAGGCCAATGTGCACGAAATCGTCCTTGTCGGCGGTT 64746 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAAT-GTTAAGTTCTTATTTCAATGGTAAAAAATTA 552197 | || | |||||| || | | | || ||| ||| |||||||| | Sbjct 64745 CAACTCGTATTCCTCGTATCGTCAAGCTCGTCTCCGACTTCTTT-AATGGTAAGGAGCCC 64687 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | || |||| || ||||||||||||||||| ||||| || | ||||| || ||| Sbjct 64686 AACAAGAGCATTAACCCCGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAAGCTGCGATT 64627 Query 552258 CTTTCTGGACAAACTGATGAAAA-ACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 || || || | ||| ||| || ||| || || | | || | || || |||| || Sbjct 64626 CTATCCGGTGACACTTCTGAGAAGACT-CAGGATCTACTTCTCCTCGACGTCTCTCCCCT 64568 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 || || ||| | ||||| | ||| ||| | ||||| || ||| | | || || || Sbjct 64567 CTCCCTCGGTATTGAAACTGCTGGTGGTGTGATGACCGCACTCATCAAGCGTAACACCAC 64508 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 | | || ||| || ||| || || || || | ||||| ||| ||| ||| Sbjct 64507 TGTCCCGACTAAGAAGTCTGAAACCTTCTCAACTTACGCCGATAACCAACCTGGTGTGCT 64448 Query 552437 AATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTT 552496 || ||| | || || || ||| | |||||| || || || | ||||| | || Sbjct 64447 CATCCAAGTCTTCGAGGGTGAACGTGCTCGCACTAAGGACAACAACCTCCTTGGGAAATT 64388 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 | | ||||| || |||||||| ||||| ||||| ||||| || || || ||||| Sbjct 64387 CGAGCTTTCTGGTATCCCACCTGCTCCCCGTGGTGTACCTCAAATCGAGGTCACCTTCGA 64328 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||||||||||| || || |||||||| |||| |||||| Sbjct 64327 CATCGATGCCAACGGTATCTTGAATGTTTCTGCCGCTGATAA 64286 Score = 96.9 bits (106), Expect = 3e-14 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 550019 TATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGT 550078 || || ||||| ||||| |||||||| | | ||||||||||||||||||||| |||||| Sbjct 65887 TACAGGTGTGTCGGTGTGTGGCAAAACGATCGAGTTGAAATTATTGCCAATGACCAAGGT 65828 Query 550079 AACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCA 550138 ||| |||| || || || ||||| | ||||| || || | | | | |||||||| Sbjct 65827 AACCGAACGACGCCTTCCTATGTCGCCTTCACCGACGGAGAGCGTCTTATCGGTGATGCC 65768 Query 550139 GCAAAATATCAAG 550151 ||||| | |||| Sbjct 65767 GCAAAGAACCAAG 65755 >seq186 Length=69704 Score = 122 bits (134), Expect = 7e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || || || || || || || |||||| | ||||||||||| || ||||| ||| Sbjct 31357 GCTGTTATCACGGTCCCTGCCTACTTCAATGACGCCCAACGTCAAGCCACGAAAGACGCT 31298 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | |||||||| ||| ||||||||||| | |||||||||||||| ||||| ||| | Sbjct 31297 GGTCAGATTGCTGGTCTTGATGTTCTTCGTGTCATCAATGAACCTACGGCTGCCGCATTG 31238 Query 550520 GCATATGGACTTGATAA 550536 || ||||| ||||| || Sbjct 31237 GCCTATGGTCTTGACAA 31221 >seq250 Length=164446 Score = 100 bits (110), Expect = 2e-15 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||||||||| || |||||| ||||| ||||| | ||||| | Sbjct 133702 AGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGG 133643 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || ||||| ||||| ||||| | ||| || |||||||| || || || Sbjct 133642 CCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCC 133583 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 ||||| ||||| ||| || || ||||| ||||||| Sbjct 133582 TTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAG 133543 >seq31 Length=238504 Score = 91.5 bits (100), Expect = 1e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | |||||||| |||||| ||| ||||||||| ||||| | | Sbjct 176101 AGACGCAGCACTAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCACTCAGAGTACGT 176042 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 ||| ||||||||||||||||| ||||| |||| || |||||||| ||||||| Sbjct 176041 CCATCCTCAAGTTGTTTTCCGGCGAAAATGAGTCGCTGTTGATCAGGGGGAATTC 175987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029192822320990