Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq109 105 8e-18 >seq109 Length=35798 Score = 105 bits (116), Expect = 8e-18 Identities = 236/353 (67%), Gaps = 1/353 (0%) Strand=Plus/Plus Query 37170 AATAA-ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228 ||||| ||| ||||| || ||| | |||||||| | || || | |||||| ||||| Sbjct 2874 AATAAGACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAA 2933 Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288 || || || ||||| || |||| ||| || ||||||||||| ||||| || |||| Sbjct 2934 TGTCAAACCCGGCATCAATCCTCGTTTCTTCATCCAAAATATGCAGGCAAACGACGCAGA 2993 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATA 37348 || ||||| ||||| | |||||||||||||| | ||| | ||||| | ||| Sbjct 2994 GAAAAAAATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTATT 3053 Query 37349 ATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAAT 37408 ||| |||||| | | ||| | ||| ||| || | || ||| |||||||| Sbjct 3054 ATCTTGAATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAAT 3113 Query 37409 TGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT 37468 | || || | | ||| || | ||||| || | ||| || ||| Sbjct 3114 AGAGTTGAATAACATCGAACGCTCTGGTGCATTTCGAATATATGTTTGAATAAGCAAAGA 3173 Query 37469 ATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACC 37521 || ||||||| |||||||| || || ||||| |||||||| ||||||| Sbjct 3174 GTAGGTTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACACC 3226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592302354874040