Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq35 178 2e-39 seq482 152 1e-31 >seq35 Length=211330 Score = 178 bits (196), Expect = 2e-39 Identities = 382/567 (67%), Gaps = 7/567 (1%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | |||||| ||||| | |||| || || || || ||||||||| |||| |||| Sbjct 160124 AGAGAAGGCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGA 160065 Query 48183 A-GCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241 | || || |||||||| | || | || || | ||| || || | |||||| |||||| Sbjct 160064 ACGCCAAG-CCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCA 160006 Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301 |||||||| ||||| || || || || || || ||| | ||| |||||| | || Sbjct 160005 GAGAAGAAAATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGT 159946 Query 48302 TTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCT 48361 | ||| ||||||| || ||||| || ||||| ||||||||| || || ||||| Sbjct 159945 TCGTCACTGATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCG 159886 Query 48362 ATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTT 48421 || || || || | | || | | ||| | || || || || Sbjct 159885 ATAGCATCAAAAAGGAAATCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGA 159826 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 | ||| |||| ||||| | ||||| || |||||||||||||||||| | ||| Sbjct 159825 GAGTAAGTCTCGGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGCGCC 159766 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541 ||| ||||| ||||| | ||||| | || || |||||||| ||||| || ||||| Sbjct 159765 TCAGCGACCTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTGACAATGCCATCA 159706 Query 48542 GAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC- 48600 || || |||||||| || |||||| | | ||| || ||| ||| | || || Sbjct 159705 GAGGCGGCAAAGAACGCGAGGACACGGGAGATGAAGAATCGTTCGCTGTCATTCAG-GCG 159647 Query 48601 ---ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 |||||| | || | |||||| | |||| |||||| |||||||||| || || Sbjct 159646 GTTGTTCCAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGC 159587 Query 48658 GAGTGCTTTTTTGTACATGCCCCATAT 48684 || || |||||||| |||||| Sbjct 159586 CTCGGCCTTCTTGTACATTTGCCATAT 159560 >seq482 Length=177074 Score = 152 bits (168), Expect = 1e-31 Identities = 362/543 (67%), Gaps = 7/543 (1%) Strand=Plus/Plus Query 48146 TGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCC 48205 || || ||||| || |||||||||||| |||| || | || |||||||| | || Sbjct 124132 TGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAGGCCAGGCATCAGGCCG 124191 Query 48206 CTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCC 48265 | || || | ||||||||| | ||||| || ||||| || ||||| ||||| || || Sbjct 124192 CGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAAGATTCCCTCGACAGCA 124251 Query 48266 GCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC--TTGTCTGAGATCCAGGAAAGCG 48323 ||||| || | |||||| | |||| || ||| ||||| || ||||| || | Sbjct 124252 GCGAATGCCACCAATCTCTCTGCAAAAG-TGC-TTCGTTTGTCAGATATCCATTTGAGGG 124309 Query 48324 CCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGC 48383 ||||||| || || ||||||||| || || || ||||| || |||||| | || Sbjct 124310 CCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTCGAAGAGATATGCGC 124369 Query 48384 ACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACAT 48443 | | ||| || || ||| || ||| | ||| | ||||| || || | Sbjct 124370 GTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAAGTTTCAGAATGAACGT 124429 Query 48444 TCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGG 48503 | || || || |||||||| || ||| | |||||| | |||||||| | | Sbjct 124430 TTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCTGCTTGCACTTCGTTTG 124489 Query 48504 AGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGA 48563 | || | ||||| |||||| || || || || || || || || |||||||| ||||||| Sbjct 124490 AAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCGGCAAAGAATGCAAGGA 124549 Query 48564 CATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCCCTGTACGTCTT 48620 | || | | |||||| ||||||| | | | | | | |||||| | | || | Sbjct 124550 CGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGTTCCAGTCGACAAGATCAT 124609 Query 48621 TGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCC 48680 ||||| | |||||| |||||||| || || |||||| |||||||| || Sbjct 124610 GAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTGCTTTCTTGTACATCTGCC 124669 Query 48681 ATA 48683 ||| Sbjct 124670 ATA 124672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931510082243840