Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq35 185 2e-41 seq482 132 9e-26 >seq35 Length=211330 Score = 185 bits (204), Expect = 2e-41 Identities = 438/653 (67%), Gaps = 18/653 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||||||||| | ||| |||||| || |||||||| ||| | Sbjct 159560 ATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATTTA 159619 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGC-AGCATTTTCTCAAGTA 25595 | || ||| | | | |||| || | || ||| ||| | | || ||| | Sbjct 159620 TCAAAAGACCTTCATGACTGGAACAACCGCCTGAATGAC-AGCGAACGATTCTTCATCTC 159678 Query 25596 C-GTGT--TGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | |||| | || |||||||| ||||||||||| || || ||||||||||| ||| | Sbjct 159679 CCGTGTCCTCGCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAACG 159738 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| | | ||||| ||| || ||||| || |||||||| |||||||| || Sbjct 159739 CTTCTCGAACGAAGTACAGGTCGCTGAGGCGCGTTGCTTCTACGGGTTCCAGATTATGAT 159798 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || | ||||| || || ||||| | |||| Sbjct 159799 GGAGAACATTCACTCCGAGACTTACTCT---CTTCTCATCGACACATACATCAAAGACCC 159855 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 | ||| | ||| || |||| ||| |||||| || || |||||||| | ||||| Sbjct 159856 TGTCGAACGTGATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATCAAGCGCAAGGC 159915 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTT--GGCGAGCGGCTGGTA 25887 |||||| || ||||||| | || | || |||| |||||||| || ||| Sbjct 159916 CGAGTGGGCTCTGCGCTGGATCAGTGAC--GAACACTCGGTTTTCGGCGAGCGTCTCGTA 159973 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 |||||||||||||| || ||||| || ||| || || || ||| ||||||| ||| | Sbjct 159974 GCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATG 160033 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||| || || || || |||||||||||||| | || ||| Sbjct 160034 AAGAAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAG 160093 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 ||| | || | || || |||||||| |||| || ||||| | | | ||| | Sbjct 160094 GGTATGCATACCGACTTCGCCTGCCTTCTCTTCA---GCCACCTCCGTCGTCGTCCTCAT 160150 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | || ||||| | |||| |||||||| || || | |||||| | ||||| Sbjct 160151 CCTGACACCGTTGAACGTATTATCAAAGAAGCAGTCGCTATCGAGCAAGAGTT 160203 >seq482 Length=177074 Score = 132 bits (146), Expect = 9e-26 Identities = 378/568 (67%), Gaps = 15/568 (3%) Strand=Plus/Minus Query 25478 TATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGG 25537 ||||| ||||||||||||| || || || ||||||| | ||||||||||| || Sbjct 124672 TATGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTCA 124613 Query 25538 CCAAGGACATGGACGGCTGGTACGCTCTATC---CAAAGACGAGCAGCATTTTCTCAAGT 25594 | | || | | || |||| ||| | || ||| ||||||| ||||| ||| Sbjct 124612 CTCATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACCC 124553 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| | ||||||||||| |||||||| ||||| |||||||| ||||||| ||| | | Sbjct 124552 ACGTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCGCT 124493 Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 | | | |||||||| | ||||| | || || || ||||| || || | Sbjct 124492 TTTCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGATGG 124433 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGA-CGTCGC 25772 |||| || || ||||| || | |||| | ||| || ||| | | || | | Sbjct 124432 AAAACGTTCATTCTGAAACTTACTCTCTGCTTATCGAT-ACATACGTCAAGGATCTTAAT 124374 Query 25773 CGA-GAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | | | | | || || || | || || || ||||| |||||||| | || || Sbjct 124373 CAACGCGCATAT---CTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCC 124317 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGA-GCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||| | || ||||| | | | || | | || |||| ||| | |||| || Sbjct 124316 GACTGGGCCCTCAAATGGAT-ATCTGACAAACGAAGCACTTTTGCAGAGAGATTGGTGGC 124258 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 || |||||||| ||||| |||||||| || ||||| || |||| |||||| | || Sbjct 124257 ATTCGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGGTTAAA 124198 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTT-TTCCAACGAGCTCATCAGCAGGGACGAGG 26008 | || || ||||| || || |||| ||| ||||||||||||||| | || || | Sbjct 124197 GAAGCGCGGCCTGATGCCTGGCCT-AACTTATTCAAACGAGCTCATCAGCCGAGATGAAG 124139 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCT 26036 || | || | ||||| || || || || Sbjct 124138 GTTTACATACCGATTTCGCGTGTCTCCT 124111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928822147797440